Publications

• MIDASim: a fast and simple simulator for realistic microbiome data.
  Microbiome Volume: 12 Page(s): 135
  07/22/2024 Authors: He M; Zhao N; Satten GA
• MERIT: Controlling Monte-Carlo error rate in large-scale Monte-Carlo hypothesis testing.
  Stat Med Volume: 43 Page(s): 279 - 295
  01/30/2024 Authors: Li Y; Hu Y-J; Satten GA
• Compositional analysis of microbiome data using the linear decomposition model (LDM).
  Bioinformatics Volume: 39
  11/01/2023 Authors: Hu Y-J; Satten GA
• Integrative analysis of microbial 16S gene and shotgun metagenomic sequencing data improves statistical efficiency.
  Res Sq
  10/03/2023 Authors: Yue Y; Read TD; Fedirko V; Satten GA; Hu Y-J
• Impact of Experimental Bias on Compositional Analysis of Microbiome Data.
  Genes (Basel) Volume: 14
  09/08/2023 Authors: Hu Y; Satten GA; Hu Y-J
• Integrative analysis of microbial 16S gene and shotgun metagenomic sequencing data improves statistical efficiency.
  bioRxiv
  06/30/2023 Authors: Yue Y; Read TD; Fedirko V; Satten GA; Hu Y-J
• Reply of the Authors: Fresh vs. frozen embryo transfer: new approach to minimize the limitations of using national surveillance data for clinical research.
  Fertil Steril Volume: 119 Page(s): 1086
  06/01/2023 Authors: Weiss MS; Luo C; Chen Y; Satten GA; Barnhart KT
• Fresh vs. frozen embryo transfer: new approach to minimize the limitations of using national surveillance data for clinical research.
  Fertil Steril Volume: 119 Page(s): 186 - 194
  02/01/2023 Authors: Weiss MS; Luo C; Zhang Y; Chen Y; Kissin DM; Satten GA; Barnhart KT
• Ranked severe maternal morbidity index for population-level surveillance at delivery hospitalization based on hospital discharge data.
  PLoS One Volume: 18 Page(s): e0294140
  01/01/2023 Authors: Kuklina EV; Ewing AC; Satten GA; Callaghan WM; Goodman DA; Ferre CD; Ko JY; Womack LS; Galang RR; Kroelinger CD
• What Can We Learn about the Bias of Microbiome Studies from Analyzing Data from Mock Communities?
  Genes (Basel) Volume: 13
  09/28/2022 Authors: Li M; Tyx RE; Rivera AJ; Zhao N; Satten GA
• The Effect of Antiretroviral Therapy for the Treatment of Human Immunodeficiency Virus (HIV)-1 in Pregnancy on Gestational Weight Gain.
  Clin Infect Dis Volume: 75 Page(s): 665 - 672
  09/10/2022 Authors: Joseph NT; Satten GA; Williams RE; Haddad LB; Jamieson DJ; Sheth AN; Badell ML
• Testing microbiome associations with survival times at both the community and individual taxon levels.
  PLoS Comput Biol Volume: 18 Page(s): e1010509
  09/01/2022 Authors: Hu Y; Li Y; Satten GA; Hu Y-J
• A rarefaction-without-resampling extension of PERMANOVA for testing presence-absence associations in the microbiome.
  Bioinformatics Volume: 38 Page(s): 3689 - 3697
  08/02/2022 Authors: Hu Y-J; Satten GA
• LOCOM: A logistic regression model for testing differential abundance in compositional microbiome data with false discovery rate control.
  Proc Natl Acad Sci U S A Volume: 119 Page(s): e2122788119
  07/26/2022 Authors: Hu Y; Satten GA; Hu Y-J
• Efficient estimation of indirect effects in case-control studies using a unified likelihood framework.
  Stat Med Volume: 41 Page(s): 2879 - 2893
  07/10/2022 Authors: Satten GA; Curtis SW; Solis-Lemus C; Leslie EJ; Epstein MP
• Integrative analysis of relative abundance data and presence-absence data of the microbiome using the LDM.
  Bioinformatics Volume: 38 Page(s): 2915 - 2917
  05/13/2022 Authors: Zhu Z; Satten GA; Hu Y-J
• Integrative analysis of relative abundance data and presence-absence data of the microbiome using the LDM.
  Bioinformatics
  03/25/2022 Authors: Zhu Z; Satten GA; Hu Y-J
• Associations between microbial communities and key chemical constituents in U.S. domestic moist snuff.
  PLoS One Volume: 17 Page(s): e0267104
  01/01/2022 Authors: Tyx RE; Rivera AJ; Satten GA; Keong LM; Kuklenyik P; Lee GE; Lawler TS; Kimbrell JB; Stanfill SB; Valentin-Blasini L
• A Bottom-up Approach to Testing Hypotheses That Have a Branching Tree Dependence Structure, with Error Rate Control.
  J Am Stat Assoc Volume: 117 Page(s): 664 - 677
  01/01/2022 Authors: Li Y; Hu Y-J; Satten GA
• A rarefaction-based extension of the LDM for testing presence-absence associations in the microbiome.
  Bioinformatics Volume: 37 Page(s): 1652 - 1657
  07/19/2021 Authors: Hu Y-J; Lane A; Satten GA
• Constraining PERMANOVA and LDM to within-set comparisons by projection improves the efficiency of analyses of matched sets of microbiome data.
  Microbiome Volume: 9 Page(s): 133
  06/09/2021 Authors: Zhu Z; Satten GA; Mitchell C; Hu Y-J
• The effect of antiretroviral therapy regimens on gestational weight gain in pregnant women with HIV
  AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY Volume: 224 Page(s): S152 - S153
  02/01/2021 Authors: Joseph NT; Satten G; Williams R; Badell M; Sheth A
• Vaginal Microbiome Composition in Early Pregnancy and Risk of Spontaneous Preterm and Early Term Birth Among African American Women.
  Front Cell Infect Microbiol Volume: 11 Page(s): 641005
  01/01/2021 Authors: Dunlop AL; Satten GA; Hu Y-J; Knight AK; Hill CC; Wright ML; Smith AK; Read TD; Pearce BD; Corwin EJ
• Testing hypotheses about the microbiome using the linear decomposition model (LDM).
  Bioinformatics Volume: 36 Page(s): 4106 - 4115
  08/15/2020 Authors: Hu Y-J; Satten GA
• Improved mediation analyses in case-control studies
  Volume: 44 Page(s): 479 - 480
  07/01/2020 Authors: Epstein MP; Leslie EJ; Satten GA
• Stability of the vaginal, oral, and gut microbiota across pregnancy among African American women: the effect of socioeconomic status and antibiotic exposure.
  PeerJ Volume: 7 Page(s): e8004
  01/01/2019 Authors: Dunlop AL; Knight AK; Satten GA; Cutler AJ; Wright ML; Mitchell RM; Read TD; Mulle J; Hertzberg VS; Hill CC
• Multisample adjusted U-statistics that account for confounding covariates.
  Stat Med Volume: 37 Page(s): 3357 - 3372
  10/15/2018 Authors: Satten GA; Kong M; Datta S
• Robust inference of population structure from next-generation sequencing data with systematic differences in sequencing.
  Bioinformatics Volume: 34 Page(s): 1157 - 1163
  04/01/2018 Authors: Liao P; Satten GA; Hu Y-J
• PhredEM: a phred-score-informed genotype-calling approach for next-generation sequencing studies.
  Genet Epidemiol Volume: 41 Page(s): 375 - 387
  07/01/2017 Authors: Liao P; Satten GA; Hu Y-J
• Restoring the Duality between Principal Components of a Distance Matrix and Linear Combinations of Predictors, with Application to Studies of the Microbiome.
  PLoS One Volume: 12 Page(s): e0168131
  01/01/2017 Authors: Satten GA; Tyx RE; Rivera AJ; Stanfill S
• Changes in vaginal community state types reflect major shifts in the microbiome.
  Microb Ecol Health Dis Volume: 28 Page(s): 1303265
  01/01/2017 Authors: Brooks JP; Buck GA; Chen G; Diao L; Edwards DJ; Fettweis JM; Huzurbazar S; Rakitin A; Satten GA; Smirnova E
• Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease.
  Genome Med Volume: 8 Page(s): 75
  07/13/2016 Authors: Shaw KA; Bertha M; Hofmekler T; Chopra P; Vatanen T; Srivatsa A; Prince J; Kumar A; Sauer C; Zwick ME
• Testing Rare-Variant Association without Calling Genotypes Allows for Systematic Differences in Sequencing between Cases and Controls.
  PLoS Genet Volume: 12 Page(s): e1006040
  05/01/2016 Authors: Hu Y-J; Liao P; Johnston HR; Allen AS; Satten GA
• Heavy metals, organic solvents, and multiple sclerosis: An exploratory look at gene-environment interactions.
  Arch Environ Occup Health Volume: 71 Page(s): 26 - 34
  01/01/2016 Authors: Napier MD; Poole C; Satten GA; Ashley-Koch A; Marrie RA; Williamson DM
• Characterization of Bacterial Communities in Selected Smokeless Tobacco Products Using 16S rDNA Analysis.
  PLoS One Volume: 11 Page(s): e0146939
  01/01/2016 Authors: Tyx RE; Stanfill SB; Keong LM; Rivera AJ; Satten GA; Watson CH
• Impact of the 5As brief counseling on smoking cessation among pregnant clients of Special Supplemental Nutrition Program for Women, Infants, and Children (WIC) clinics in Ohio.
  Prev Med Volume: 81 Page(s): 438 - 443
  12/01/2015 Authors: Olaiya O; Sharma AJ; Tong VT; Dee D; Quinn C; Agaku IT; Conrey EJ; Kuiper NM; Satten GA
• A statistical approach for rare-variant association testing in affected sibships.
  Am J Hum Genet Volume: 96 Page(s): 543 - 554
  04/02/2015 Authors: Epstein MP; Duncan R; Ware EB; Jhun MA; Bielak LF; Zhao W; Smith JA; Peyser PA; Kardia SLR; Satten GA
• Population-based association and gene by environment interactions in Genetic Analysis Workshop 18.
  Genet Epidemiol Volume: 38 Suppl 1 Page(s): S49 - S56
  09/01/2014 Authors: Satten GA; Biswas S; Papachristou C; Turkmen A; Knig IR
• Utilizing population controls in rare-variant case-parent association tests.
  Am J Hum Genet Volume: 94 Page(s): 845 - 853
  06/05/2014 Authors: Jiang Y; Satten GA; Han Y; Epstein MP; Heinzen EL; Goldstein DB; Allen AS
• Robust regression analysis of copy number variation data based on a univariate score.
  PLoS One Volume: 9 Page(s): e86272
  01/01/2014 Authors: Satten GA; Allen AS; Ikeda M; Mulle JG; Warren ST
• Genetic Analysis Workshop 18: Methods and strategies for analyzing human sequence and phenotype data in members of extended pedigrees.
  Volume: 8 Page(s): S1
  01/01/2014 Authors: Bickebller H; Bailey JN; Beyene J; Cantor RM; Cordell HJ; Culverhouse RC; Engelman CD; Fardo DW; Ghosh S; Knig IR
• Interaction of HLA-DRB1*1501 and TNF-Alpha in a Population-based Case-control Study of Multiple Sclerosis.
  Immunol Infect Dis Volume: 1 Page(s): 10 - 17
  09/01/2013 Authors: Williamson DM; Marrie RA; Ashley-Koch A; Satten GA
• Effects of maternal smokeless tobacco use on selected pregnancy outcomes in Alaska Native women: a case-control study.
  Acta Obstet Gynecol Scand Volume: 92 Page(s): 648 - 655
  06/01/2013 Authors: England LJ; Kim SY; Shapiro-Mendoza CK; Wilson HG; Kendrick JS; Satten GA; Lewis CA; Tucker MJ; Callaghan WM
• Heavy Metals, Organic Solvents and Multiple Sclerosis: An Exploratory Analysis of Gene-environment Interactions
  Volume: 36 Page(s): 758 - 758
  11/01/2012 Authors: Napier MD; Poole C; Satten GA; Ashley-Koch A; Marrie RA; Williamson DM
• Testing Copy Number Variant/Trait Associations Detected Using Manhattan Plots
  Volume: 36 Page(s): 767 - 767
  11/01/2012 Authors: Satten GA; Ramachandran D; Mulle JG; Allen AS; Bean LJH; Maslen C; Sherman SL; Reeves RH; Zwick ME
• A permutation procedure to correct for confounders in case-control studies, including tests of rare variation.
  Am J Hum Genet Volume: 91 Page(s): 215 - 223
  08/10/2012 Authors: Epstein MP; Duncan R; Jiang Y; Conneely KN; Allen AS; Satten GA
• California Very Preterm Birth Study: design and characteristics of the population- and biospecimen bank-based nested case-control study.
  Paediatr Perinat Epidemiol Volume: 26 Page(s): 250 - 263
  05/01/2012 Authors: Kharrazi M; Pearl M; Yang J; DeLorenze GN; Bean CJ; Callaghan WM; Grant A; Lackritz E; Romero R; Satten GA
• Stratification-score matching improves correction for confounding by population stratification in case-control association studies.
  Genet Epidemiol Volume: 36 Page(s): 195 - 205
  04/01/2012 Authors: Epstein MP; Duncan R; Broadaway KA; He M; Allen AS; Satten GA
• Age-associated DNA methylation in pediatric populations.
  Genome Res Volume: 22 Page(s): 623 - 632
  04/01/2012 Authors: Alisch RS; Barwick BG; Chopra P; Myrick LK; Satten GA; Conneely KN; Warren ST
• A Novel Permutation Strategy to Correct for Population Stratification in Case-Control Studies of Rare Variation
  Volume: 36 Page(s): 124 - 124
  02/01/2012 Authors: Epstein MP; Jiang Y; Conneely KN; Duncan R; Allen AS; Satten GA
• Adjusting Rare Variant Association Tests for Population Stratification Using the Stratification Score
  Volume: 36 Page(s): 149 - 149
  02/01/2012 Authors: Satten GA; Ling B; Epstein MP; Allen AS
• Maternal smokeless tobacco use in Alaska Native women and singleton infant birth size.
  Acta Obstet Gynecol Scand Volume: 91 Page(s): 93 - 103
  01/01/2012 Authors: England LJ; Kim SY; Shapiro-Mendoza CK; Wilson HG; Kendrick JS; Satten GA; Lewis CA; Whittern P; Tucker MJ; Callaghan WM
• A weighted accumulation test for associating rare genetic variation with quantitative phenotypes.
  BMC Proc Volume: 5 Suppl 9 Page(s): S6
  11/29/2011 Authors: Xing C; Satten GA; Allen AS
• Control for confounding in case-control studies using the stratification score, a retrospective balancing score.
  Am J Epidemiol Volume: 173 Page(s): 752 - 760
  04/01/2011 Authors: Allen AS; Satten GA
• Stratification-Score-Based Matching Outperforms Other Matching Approaches when Controlling for Confounding
  Volume: 34 Page(s): 946 - 946
  12/01/2010 Authors: Satten GA; Epstein MP; Duncan R; Broadaway A; Allen AS
• Microdeletions of 3q29 confer high risk for schizophrenia.
  Am J Hum Genet Volume: 87 Page(s): 229 - 236
  08/13/2010 Authors: Mulle JG; Dodd AF; McGrath JA; Wolyniec PS; Mitchell AA; Shetty AC; Sobreira NL; Valle D; Rudd MK; Satten G
• Score-based adjustment for confounding by population stratification in genetic association studies.
  Genet Epidemiol Volume: 34 Page(s): 383 - 385
  07/01/2010 Authors: Allen A; Epstein MP; Satten GA
• Late preterm birth and risk of developing asthma.
  J Pediatr Volume: 157 Page(s): 74 - 78
  07/01/2010 Authors: Abe K; Shapiro-Mendoza CK; Hall LR; Satten GA
• SNPs in CAST are associated with Parkinson disease: a confirmation study.
  Am J Med Genet B Neuropsychiatr Genet Volume: 153B Page(s): 973 - 979
  06/05/2010 Authors: Allen AS; Satten GA
• Percentage of gestational diabetes mellitus attributable to overweight and obesity.
  Am J Public Health Volume: 100 Page(s): 1047 - 1052
  06/01/2010 Authors: Kim SY; England L; Wilson HG; Bish C; Satten GA; Dietz P
• Fast and robust association tests for untyped SNPs in case-control studies.
  Hum Hered Volume: 70 Page(s): 167 - 176
  01/01/2010 Authors: Allen AS; Satten GA; Bray SL; Dudbridge F; Epstein MP
• Genome-wide association analysis of rheumatoid arthritis data via haplotype sharing.
  BMC Proc Volume: 3 Suppl 7 Page(s): S30
  12/15/2009 Authors: Allen AS; Satten GA
• Effect of population stratification on the identification of significant single-nucleotide polymorphisms in genome-wide association studies.
  BMC Proc Volume: 3 Suppl 7 Page(s): S13
  12/15/2009 Authors: Sarasua SM; Collins JS; Williamson DM; Satten GA; Allen AS
• Scoring and Calling Copy Number Variants
  Volume: 33 Page(s): 814 - 814
  12/01/2009 Authors: Satten GA; Allen AS; Ikeda M; Mulle JG; Warren ST
• A novel haplotype-sharing approach for genome-wide case-control association studies implicates the calpastatin gene in Parkinson's disease.
  Genet Epidemiol Volume: 33 Page(s): 657 - 667
  12/01/2009 Authors: Allen AS; Satten GA
• A regression-based association test for case-control studies that uses inferred ancestral haplotype similarity.
  Ann Hum Genet Volume: 73 Page(s): 520 - 526
  09/01/2009 Authors: Liu Y; Li Y-J; Satten GA; Allen AS; Tzeng J-Y
• Fast and Robust Tests of Association for Untyped SNPs in Case-Control Studies
  Volume: 32 Page(s): 674 - 674
  11/01/2008 Authors: Epstein MP; Allen AS; Griffiths S; Dudbridge E; Satten GA
• New Haplotype Sharing Method for Genome-Wide Case-Control Association Studies Implicates Gene for Parkinson's Disease
  Volume: 32 Page(s): 674 - 674
  11/01/2008 Authors: Allen AS; Satten GA
• MALDI-TOF mass spectrometry as a tool for differentiation of invasive and noninvasive Streptococcus pyogenes isolates.
  FEMS Immunol Med Microbiol Volume: 53 Page(s): 333 - 342
  08/01/2008 Authors: Moura H; Woolfitt AR; Carvalho MG; Pavlopoulos A; Teixeira LM; Satten GA; Barr JR
• A signed-rank test for clustered data.
  Biometrics Volume: 64 Page(s): 501 - 507
  06/01/2008 Authors: Datta S; Satten GA
• Robust estimation and testing of haplotype effects in case-control studies.
  Genet Epidemiol Volume: 32 Page(s): 29 - 40
  01/01/2008 Authors: Allen AS; Satten GA
• Simple methods for high-density copy number variation data
  Volume: 31 Page(s): 612 - 612
  09/01/2007 Authors: Satten GA; Mulle JG; Allen AS; Epstein MP; Warren ST
• Simple correction for population stratification in case-control studies
  Volume: 31 Page(s): 496 - 496
  07/01/2007 Authors: Satten GA; Epstein MP; Allen AS
• A simple and improved correction for population stratification in case-control studies.
  Am J Hum Genet Volume: 80 Page(s): 921 - 930
  05/01/2007 Authors: Epstein MP; Allen AS; Satten GA
• Inference on haplotype/disease association using parent-affected-child data: the projection conditional on parental haplotypes method.
  Genet Epidemiol Volume: 31 Page(s): 211 - 223
  04/01/2007 Authors: Allen AS; Satten GA
• Statistical models for haplotype sharing in case-parent trio data.
  Volume: 64 Page(s): 35 - 44
  01/01/2007 Authors: Allen AS; Satten GA
• Simple methods for assessing haplotype-environment interactions in case-only and case-control studies.
  Genet Epidemiol Volume: 31 Page(s): 75 - 90
  01/01/2007 Authors: Kwee LC; Epstein MP; Manatunga AK; Duncan R; Allen AS; Satten GA
• Genetic studies of a cluster of acute lymphoblastic leukemia cases in Churchill County, Nevada.
  Environ Health Perspect Volume: 115 Page(s): 158 - 164
  01/01/2007 Authors: Steinberg KK; Relling MV; Gallagher ML; Greene CN; Rubin CS; French D; Holmes AK; Carroll WL; Koontz DA; Sampson EJ
• Association mapping via a class of haplotype-sharing statistics.
  BMC Proc Volume: 1 Suppl 1 Page(s): S123
  01/01/2007 Authors: Allen AS; Satten GA
• Investigating childhood leukemia in Churchill County, Nevada.
  Environ Health Perspect Volume: 115 Page(s): 151 - 157
  01/01/2007 Authors: Rubin CS; Holmes AK; Belson MG; Jones RL; Flanders WD; Kieszak SM; Osterloh J; Luber GE; Blount BC; Barr DB
• Improved association analyses of disease subtypes in case-parent triads.
  Genet Epidemiol Volume: 30 Page(s): 209 - 219
  04/01/2006 Authors: Epstein MP; Waldman ID; Satten GA
• Detection and identification of protein fingerprints of Streptococcus pyogenes whole cells by MALDI-TOF MS and proteome database search as a tool for strain differentiation
  Volume: 231
  03/26/2006 Authors: Moura H; Woolfitt AR; Carvalho MG; Pavlopoulos AJ; Teixeira LM; Facklam R; Satten G; Barr JR
• Robust testing of haplotype/disease association.
  BMC Genet Volume: 6 Suppl 1 Page(s): S69
  12/30/2005 Authors: Allen AS; Satten GA
• Genetic Analysis Workshop 14: microsatellite and single-nucleotide polymorphism marker loci for genome-wide scans.
  BMC Genet Volume: 6 Suppl 1 Page(s): S1
  12/30/2005 Authors: Bailey-Wilson JE; Almasy L; de Andrade M; Bailey J; Bickebller H; Cordell HJ; Daw EW; Goldin L; Goode EL; Gray-McGuire C
• Association tests based on haplotype similarity in Case-Parent trio studies
  Volume: 29 Page(s): 275 - 276
  11/01/2005 Authors: Satten GA; Allen AS
• Robust estimation and testing of haplotype effects in case-control studies
  Volume: 29 Page(s): 234 - 234
  11/01/2005 Authors: Allen AS; Satten GA
• Improved association analyses of disease subtypes in case-parent triads
  Volume: 29 Page(s): 246 - 246
  11/01/2005 Authors: Epstein MP; Waldman ID; Satten GA
• Simple retrospective approaches for detecting interaction effects in case-control studies
  Volume: 29 Page(s): 259 - 260
  11/01/2005 Authors: Kwee LC; Satten GA; Manatunga AK; Duncan R; Epstein MP
• Genetic association analysis using data from triads and unrelated subjects.
  Am J Hum Genet Volume: 76 Page(s): 592 - 608
  04/01/2005 Authors: Epstein MP; Veal CD; Trembath RC; Barker JNWN; Li C; Satten GA
• Standardization and denoising algorithms for mass spectra to classify whole-organism bacterial specimens.
  Bioinformatics Volume: 20 Page(s): 3128 - 3136
  11/22/2004 Authors: Satten GA; Datta S; Moura H; Woolfitt AR; Carvalho MDG; Carlone GM; De BK; Pavlopoulos A; Barr JR
• Comparison of prospective and retrospective methods for haplotype inference in case-control studies.
  Genet Epidemiol Volume: 27 Page(s): 192 - 201
  11/01/2004 Authors: Satten GA; Epstein MP
• An empirical bayes adjustment to increase the sensitivity of detecting differentially expressed genes in microarray experiments.
  Bioinformatics Volume: 20 Page(s): 235 - 242
  01/22/2004 Authors: Datta S; Satten GA; Benos DJ; Xia J; Heslin MJ; Datta S
• How special is a 'special' interval: modeling departure from length-biased sampling in renewal processes.
  Biostatistics Volume: 5 Page(s): 145 - 151
  01/01/2004 Authors: Satten GA; Kong F; Wright DJ; Glynn SA; Schreiber GB
• Bootstrap calibration of TRANSMIT for informative missingness of parental genotype data.
  Volume: 4 Suppl 1 Page(s): S39
  12/31/2003 Authors: Allen AS; Collins JS; Rathouz PJ; Selander CL; Satten GA
• Inference on haplotype effects in case-control studies using unphased genotype data.
  Am J Hum Genet Volume: 73 Page(s): 1316 - 1329
  12/01/2003 Authors: Epstein MP; Satten GA
• Random error and undercounting in birth defects surveillance data: implications for inference.
  Birth Defects Res A Clin Mol Teratol Volume: 67 Page(s): 610 - 616
  09/01/2003 Authors: Correa-Villaseor A; Satten GA; Rolka H; Langlois P; Devine O
• Performance characteristics of a new less sensitive HIV-1 enzyme immunoassay for use in estimating HIV seroincidence.
  J Acquir Immune Defic Syndr Volume: 33 Page(s): 625 - 634
  08/15/2003 Authors: Kothe D; Byers RH; Caudill SP; Satten GA; Janssen RS; Hannon WH; Mei JV
• Informative missingness in genetic association studies: case-parent designs.
  Am J Hum Genet Volume: 72 Page(s): 671 - 680
  03/01/2003 Authors: Allen AS; Rathouz PJ; Satten GA
• Marginal analyses of clustered data when cluster size is informative.
  Biometrics Volume: 59 Page(s): 36 - 42
  03/01/2003 Authors: Williamson JM; Datta S; Satten GA
• HFE genotype and transferrin saturation in the United States.
  Genet Med Volume: 5 Page(s): 304 - 310
  01/01/2003 Authors: Cogswell ME; Gallagher ML; Steinberg KK; Caudill PhD SP; Looker AC; Bowman BA; Gunter EW; Franks AL; Satten GA; Khoury MJ
• Estimation of integrated transition hazards and stage occupation probabilities for non-Markov systems under dependent censoring.
  Biometrics Volume: 58 Page(s): 792 - 802
  12/01/2002 Authors: Datta S; Satten GA
• HIV seroincidence among patients at clinics for sexually transmitted diseases in nine cities in the United States.
  J Acquir Immune Defic Syndr Volume: 29 Page(s): 478 - 483
  04/15/2002 Authors: Weinstock H; Dale M; Gwinn M; Satten GA; Kothe D; Mei J; Royalty J; Linley L; Fridlund C; Parekh B
• HIV seroconverting donors delay their return: screening test implications.
  Transfusion Volume: 42 Page(s): 414 - 421
  04/01/2002 Authors: Schreiber GB; Glynn SA; Satten GA; Kong F; Wright D; Busch MP; Tu Y; Kleinman SH; Retrovirus Epidemiology Donor Study
• Marginal estimation for multi-stage models: waiting time distributions and competing risks analyses.
  Stat Med Volume: 21 Page(s): 3 - 19
  01/15/2002 Authors: Satten GA; Datta S
• Subtype-specific transmission probabilities for human immunodeficiency virus type 1 among injecting drug users in Bangkok, Thailand.
  Am J Epidemiol Volume: 155 Page(s): 159 - 168
  01/15/2002 Authors: Hudgens MG; Longini IM; Vanichseni S; Hu DJ; Kitayaporn D; Mock PA; Halloran ME; Satten GA; Choopanya K; Mastro TD
• Development and validation of a serologic testing algorithm for recent HIV seroconversion
  Page(s): 290 - 304
  01/01/2002 Authors: Satten GA; Janssen RS; Stramer S; Busch MP
• Taking the challenge: Finding recurrence risks in idiopathic mental retardation.
  Volume: 69 Page(s): 224 - 224
  10/01/2001 Authors: Collins JS; Nave AF; Satten GA; Stevenson RE
• Analysis of dynamic cohort data.
  Am J Epidemiol Volume: 154 Page(s): 366 - 372
  08/15/2001 Authors: Williamson JM; Satten GA; Hanson JA; Weinstock H; Datta S
• Effect of interventions to control sexually transmitted disease on the incidence of HIV infection in female sex workers.
  AIDS Volume: 15 Page(s): 1421 - 1431
  07/27/2001 Authors: Ghys PD; Diallo MO; Ettigne-Traor V; Satten GA; Anoma CK; Maurice C; Kadjo JC; Coulibaly IM; Wiktor SZ; Greenberg AE
• Evaluation of a sensitive/less-sensitive testing algorithm using the 3A11-LS assay for detecting recent HIV seroconversion among individuals with HIV-1 subtype B or E infection in Thailand.
  AIDS Res Hum Retroviruses Volume: 17 Page(s): 453 - 458
  03/20/2001 Authors: Parekh BS; Hu DJ; Vanichseni S; Satten GA; Candal D; Young NL; Kitayaporn D; Srisuwanvilai LO; Rakhtam S; Janssen R
• Nonparametric maximum likelihood estimation for competing risks survival data subject to interval censoring and truncation.
  Biometrics Volume: 57 Page(s): 74 - 80
  03/01/2001 Authors: Hudgens MG; Satten GA; Longini IM
• Accounting for unmeasured population substructure in case-control studies of genetic association using a novel latent-class model.
  Am J Hum Genet Volume: 68 Page(s): 466 - 477
  02/01/2001 Authors: Satten GA; Flanders WD; Yang Q
• The Kaplan-Meier Estimator as an Inverse-Probability-of-Censoring Weighted Average.
  Am Stat Volume: 55 Page(s): 207 - 210
  01/01/2001 Authors: Satten GA; Datta S
• Dilutional Vironostika HIV-1 microelisa system to detect early HIV-1 infection for clinical/epidemiological studies and incidence estimates
  Volume: 40 Page(s): 86S - 87S
  10/01/2000 Authors: Rawal BD; Satten GA; Janssen RS; Busch MP
• Nonparametric estimation for the three-stage irreversible illness-death model.
  Biometrics Volume: 56 Page(s): 841 - 847
  09/01/2000 Authors: Datta S; Satten GA; Datta S
• Conditional and unconditional categorical regression models with missing covariates.
  Biometrics Volume: 56 Page(s): 384 - 388
  06/01/2000 Authors: Satten GA; Carroll RJ
• Repeat screening for HIV: when to test and why.
  J Acquir Immune Defic Syndr Volume: 23 Page(s): 339 - 345
  04/01/2000 Authors: Kaplan EH; Satten GA
• Detection of early HIV infection and estimation of incidence using a sensitive/less-sensitive enzyme immunoassay testing strategy at anonymous counseling and testing sites in San Francisco.
  J Acquir Immune Defic Syndr Volume: 22 Page(s): 484 - 489
  12/15/1999 Authors: McFarland W; Busch MP; Kellogg TA; Rawal BD; Satten GA; Katz MH; Dilley J; Janssen RS
• Estimating the extent of tracking in interval-censored chain-of-events data.
  Biometrics Volume: 55 Page(s): 1228 - 1231
  12/01/1999 Authors: Satten GA
• Validating marker-based incidence estimates in repeatedly screened populations.
  Biometrics Volume: 55 Page(s): 1224 - 1227
  12/01/1999 Authors: Satten GA; Janssen R; Busch MP; Datta S
• Hold everything! Holding policies for protecting plasma supplies.
  Math Biosci Volume: 160 Page(s): 159 - 173
  09/01/1999 Authors: Kaplan EH; Satten GA
• Discrete-time nonparametric estimation for semi-Markov models of chain-of-events data subject to interval censoring and truncation.
  Biometrics Volume: 55 Page(s): 514 - 522
  06/01/1999 Authors: Sternberg MR; Satten GA
• Fitting semi-Markov models to interval-censored data with unknown initiation times.
  Biometrics Volume: 55 Page(s): 507 - 513
  06/01/1999 Authors: Satten GA; Sternberg MR
• HIV seroincidence and risk factors among patients repeatedly tested for HIV attending sexually transmitted disease clinics in the United States, 1991 to 1996. STD Clinic HIV Seroincidence Study Group.
  J Acquir Immune Defic Syndr Hum Retrovirol Volume: 19 Page(s): 506 - 512
  12/15/1998 Authors: Weinstock H; Sweeney S; Satten GA; Gwinn M
• HIV incidence in first time vs. repeat blood donors.
  Volume: 38 Page(s): 80S - 80S
  10/01/1998 Authors: Busch MP; Rawal BD; Watenabe K; Schreiber GB; Satten GA; Janssen RS
• Sensitivity of confidential unit exclusion and anti-HBc and syphilis tests for detection of recent vs longstanding HIV infections in blood donors.
  Volume: 38 Page(s): 72S - 72S
  10/01/1998 Authors: Busch MP; Aberle-Grasse J; Rawal BD; Stramer SL; Williams AE; Satten GA; Janssen RS
• Detection of hepatitis B seroconversion by highly sensitive assays for surface antigen and HBV DNA.
  Volume: 38 Page(s): 91S - 91S
  10/01/1998 Authors: Kuhns MC; McNamara AL; Peterson B; DiMarco A; Satten GA
• Demographic correlates of HIV incidence among first-time blood donors.
  Volume: 38 Page(s): 81S - 81S
  10/01/1998 Authors: Busch MP; Aberle-Grasse J; Rawal BD; Stramer SL; Williams AE; Satten GA; Janssen RS
• The incubation period to AIDS in injecting drug users estimated from prevalent cohort data, accounting for death prior to an AIDS diagnosis.
  AIDS Volume: 12 Page(s): 1537 - 1544
  08/20/1998 Authors: Hendriks JC; Satten GA; van Ameijden EJ; van Druten HA; Coutinho RA; van Griensven GJ
• New testing strategy to detect early HIV-1 infection for use in incidence estimates and for clinical and prevention purposes.
  JAMA Volume: 280 Page(s): 42 - 48
  07/01/1998 Authors: Janssen RS; Satten GA; Stramer SL; Rawal BD; O'Brien TR; Weiblen BJ; Hecht FM; Jack N; Cleghorn FR; Kahn JO
• Declining morbidity and mortality among patients with advanced human immunodeficiency virus infection. HIV Outpatient Study Investigators.
  N Engl J Med Volume: 338 Page(s): 853 - 860
  03/26/1998 Authors: Palella FJ; Delaney KM; Moorman AC; Loveless MO; Fuhrer J; Satten GA; Aschman DJ; Holmberg SD
• Estimation of HIV incidence in blood donors using a detuned anti-HIV EIA test strategy.
  Volume: 37 Page(s): S433 - S433
  09/01/1997 Authors: Busch MP; Rawal BD; Stramer SL; Satten GA; Janssen RS
• Time course of viremia and antibody seroconversion following human immunodeficiency virus exposure.
  Am J Med Volume: 102 Page(s): 117 - 124
  05/19/1997 Authors: Busch MP; Satten GA
• Steady-state calculation of the risk of HIV infection from transfusion of screened blood from repeat donors.
  Math Biosci Volume: 141 Page(s): 101 - 113
  04/15/1997 Authors: Satten GA
• Late postnatal mother-to-child transmission of HIV-1 in Abidjan, Cte d'Ivoire.
  Lancet Volume: 349 Page(s): 1054 - 1059
  04/12/1997 Authors: Ekpini ER; Wiktor SZ; Satten GA; Adjorlolo-Johnson GT; Sibailly TS; Ou CY; Karon JM; Brattegaard K; Whitaker JP; Gnaore E
• HIV plasma RNA for confirmation of HIV-1 p24Ag/anti-HIV reactivity in seroconverting (SC) donors.
  Volume: 36 Page(s): S163 - S163
  09/01/1996 Authors: Busch MP; Satten GA; Herman SA; Sakahara NS; Garrett PE; Stramer SL; Schumacher R
• Time course and kinetics of HIV viremia during primary infection.
  Volume: 36 Page(s): S164 - S164
  09/01/1996 Authors: Busch MP; Satten GA; Herman SA; Henrard DR; Sakahara NS; Garrett PE; Schumacher R
• Use of immunological markers and continuous-time Markov models to estimate progression of HIV infection in homosexual men.
  AIDS Volume: 10 Page(s): 649 - 656
  06/01/1996 Authors: Hendriks JC; Satten GA; Longini IM; van Druten HA; Schellekens PT; Coutinho RA; van Griensven GJ
• Estimated risk of transmission of the human immunodeficiency virus by screened blood in the United States.
  N Engl J Med Volume: 333 Page(s): 1721 - 1725
  12/28/1995 Authors: Lackritz EM; Satten GA; Aberle-Grasse J; Dodd RY; Raimondi VP; Janssen RS; Lewis WF; Notari EP; Petersen LR
• UPPER AND LOWER-BOUND DISTRIBUTIONS THAT GIVE SIMULTANEOUS CONFIDENCE-INTERVALS FOR QUANTILES
  JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION Volume: 90 Page(s): 747 - 752
  06/01/1995 Authors: SATTEN GA
• Time course of detection of viral and serologic markers preceding human immunodeficiency virus type 1 seroconversion: implications for screening of blood and tissue donors.
  Transfusion Volume: 35 Page(s): 91 - 97
  02/01/1995 Authors: Busch MP; Lee LL; Satten GA; Henrard DR; Farzadegan H; Nelson KE; Read S; Dodd RY; Petersen LR
• Modelling the female-to-male per-act HIV transmission probability in an emerging epidemic in Asia.
  Volume: 13 Page(s): 2097 - 2106
  10/15/1994 Authors: Satten GA; Mastro TD; Longini IM
• Direct oral questions to blood donors: the impact on screening for human immunodeficiency virus.
  Transfusion Volume: 34 Page(s): 769 - 774
  09/01/1994 Authors: Johnson ES; Doll LS; Satten GA; Lenes B; Shafer AW; Kamel H; Casanova RJ; Petersen LR
• Estimation of incidence of HIV infection using cross-sectional marker surveys.
  Biometrics Volume: 50 Page(s): 675 - 688
  09/01/1994 Authors: Statten GA; Longini IM
• Immunologic marker paths for seroconversion: single determinations of immunoglobulin A and beta 2-microglobulin are not adequate to estimate time of HIV infection. Multicohort Analysis Project Workshop. Part II.
  AIDS Volume: 8 Page(s): 923 - 933
  07/01/1994
• IMMUNOLOGICAL MARKER PATHS FOR SEROCONVERSION - SINGLE DETERMINATIONS OF IMMUNOGLOBULIN-A AND BETA(2)-MICROGLOBULIN ARE NOT ADEQUATE TO ESTIMATE TIME OF HIV-INFECTION
  AIDS Volume: 8 Page(s): 923 - 933
  07/01/1994 Authors: BIRD G; COOK R; DEANGELIS D; FAREWELL V; FIELDING K; FORE A; GORE S; KRAMER A; LEE C; MCNEIL A
• IMMUNOLOGICAL MARKERS OF AIDS PROGRESSION - CONSISTENCY ACROSS 5 HIV-INFECTED COHORTS
  AIDS Volume: 8 Page(s): 911 - 921
  07/01/1994 Authors: BIRD G; COOK R; DEANGELIS D; FAREWELL V; FIELDING K; FORE A; GORE S; KRAMER A; LEE C; MCNEIL A
• Immunologic markers of AIDS progression: consistency across five HIV-infected cohorts. Multicohort Analysis Project Workshop. Part I.
  AIDS Volume: 8 Page(s): 911 - 921
  07/01/1994
• Duration of time from onset of human immunodeficiency virus type 1 infectiousness to development of detectable antibody. The HIV Seroconversion Study Group.
  Transfusion Volume: 34 Page(s): 283 - 289
  04/01/1994 Authors: Petersen LR; Satten GA; Dodd R; Busch M; Kleinman S; Grindon A; Lenes B
• Probability of female-to-male transmission of HIV-1 in Thailand.
  Lancet Volume: 343 Page(s): 204 - 207
  01/22/1994 Authors: Mastro TD; Satten GA; Nopkesorn T; Sangkharomya S; Longini IM
• Guidelines for designing rapid assessment surveys of HIV seroprevalence among hospitalized patients. Centers for Disease Control and Prevention.
  Public Health Rep Volume: 109 Page(s): 53 - 59
  01/01/1994 Authors: Schwartlnder B; Janssen RS; Satten GA; Critchley SE; Petersen LR; Dondero TJ
• Risk factors for HIV infection among abandoned Romanian children.
  AIDS Volume: 7 Page(s): 1617 - 1624
  12/01/1993 Authors: Hersh BS; Popovici F; Jezek Z; Satten GA; Apetrei RC; Beldescu N; George JR; Shapiro CN; Gayle HD; Heymann DL
• Conditional regression analysis of the exposure-disease odds ratio using known probability-of-exposure values.
  Biometrics Volume: 49 Page(s): 429 - 440
  06/01/1993 Authors: Satten GA; Kupper LL
• BACKCALCULATION OF HIV-INFECTION RATES - COMMENT AND REJOINDER
  STATISTICAL SCIENCE Volume: 8 Page(s): 102 - 119
  05/01/1993 Authors: BACCHETTI P; SEGAL MR; JEWELL NP; BROOKMEYER R; CARLIN JB; GELMAN A; GAIL MH; ROSENBERG PS; DEGRUTTOLA V; PAGANO M
• TIME PERIOD FROM INFECTIOUSNESS AS BLOOD-DONOR TO DEVELOPMENT OF DETECTABLE ANTIBODY AND THE RISK OF HIV TRANSMISSION FROM TRANSFUSION OF SCREENED BLOOD
  Volume: 32 Page(s): S46 - S46
  10/01/1992 Authors: PETERSEN LR; SATTEN G; DODD R
• HIV infection among patients in U.S. acute care hospitals. Strategies for the counseling and testing of the hospital patients. The Hospital HIV Surveillance Group.
  N Engl J Med Volume: 327 Page(s): 445 - 452
  08/13/1992 Authors: Janssen RS; St Louis ME; Satten GA; Critchley SE; Petersen LR; Stafford RS; Ward JW; Hanson DL; Olivo N; Schable CA
• Molecular epidemiology of HIV transmission in a dental practice.
  Science Volume: 256 Page(s): 1165 - 1171
  05/22/1992 Authors: Ou CY; Ciesielski CA; Myers G; Bandea CI; Luo CC; Korber BT; Mullins JI; Schochetman G; Berkelman RL; Economou AN
• HIV infection in American Indians and Alaska Natives: surveys in the Indian Health Service.
  J Acquir Immune Defic Syndr (1988) Volume: 5 Page(s): 803 - 809
  01/01/1992 Authors: Conway GA; Ambrose TJ; Chase E; Hooper EY; Helgerson SD; Johannes P; Epstein MR; McRae BA; Munn VP; Keevama L
• CORRECTION
  AMERICAN JOURNAL OF EPIDEMIOLOGY Volume: 131 Page(s): 1102 - 1102
  06/01/1990 Authors: SATTEN GA
• CORRECTION
  AMERICAN JOURNAL OF EPIDEMIOLOGY Volume: 131 Page(s): 578 - 578
  03/01/1990 Authors: SATTEN GA
• Continued fraction representation for expected cell counts of a 2 x 2 table: a rapid and exact method for conditional maximum likelihood estimation.
  Biometrics Volume: 46 Page(s): 217 - 223
  03/01/1990 Authors: Satten GA; Kupper LL
• Sample size determination for pair-matched case-control studies where the goal is interval estimation of the odds ratio.
  J Clin Epidemiol Volume: 43 Page(s): 55 - 59
  01/01/1990 Authors: Satten GA; Kupper LL
• Sample size requirements for interval estimation of the odds ratio.
  Am J Epidemiol Volume: 131 Page(s): 177 - 184
  01/01/1990 Authors: Satten GA; Kupper LL
• Critical phenomena in randomly stirred fluids: Correlation functions, equation of motion, and crossover behavior.
  Phys Rev A Gen Phys Volume: 33 Page(s): 3415 - 3432
  05/01/1986 Authors: Satten G; Ronis D
• Critical phenomena in randomly stirred fluids.
  Phys Rev Lett Volume: 55 Page(s): 91 - 94
  07/01/1985 Authors: Satten G; Ronis D