Publications

• Self-authenticating genomic materials in Escherichia coli via advanced genome signatures.
  Commun Biol Volume: 8 Page(s): 762
  05/16/2025 Authors: Wang Z; Cui J; Liu Q; Li J; Guo C; Liu Y; Jiang C; Xue H; Li J; Ke Y
• Differential Sensitivity to Interepitope Spacing in Mast Cells and B Cells Enables Design of Hypoallergenic Allergen Vaccine Immunogens.
  ACS Nano Volume: 19 Page(s): 15371 - 15384
  04/29/2025 Authors: Cossette BJ; Shen L; Bermudez A; Freire Haddad H; Shetty S; Sylvers J; Yuan F; Ke Y; Collier JH
• Two-Dimensional, Chiral Colloidal Superlattices Engineered with DNA Origami.
  Nano Lett Volume: 25 Page(s): 5705 - 5712
  04/09/2025 Authors: Dong B; Xu X; Guan R; Jiang S; Ma L; Hu H; Ke Y; Liu N; Lan X
• DNA Origami Colloidal Crystals: Opportunities and Challenges.
  Nano Lett Volume: 25 Page(s): 16 - 27
  01/08/2025 Authors: Lee J; Kim J; Posnjak G; Ershova A; Hayakawa D; Shih WM; Rogers WB; Ke Y; Liedl T; Lee S
• Controlled mechanochemical coupling of anti-junctions in DNA origami arrays.
  Nat Commun Volume: 15 Page(s): 7894
  09/10/2024 Authors: Cole F; Pfeiffer M; Wang D; Schrder T; Ke Y; Tinnefeld P
• Simulation-Guided Rational Design of DNA Walker-Based Theranostic Platform.
  Small Volume: 20 Page(s): e2400963
  08/01/2024 Authors: Mou J; Zhang H; Zhang L; Zhang B; Liu J; Zheng S; Kou Q; Wang H; Su X; Guo S
• Dynamic Gold Nanostructures Based on DNA Self Assembly.
  Small Volume: 20 Page(s): e2308862
  06/01/2024 Authors: Kou B; Wang Z; Mousavi S; Wang P; Ke Y
• Free-Standing DNA Origami Superlattice to Facilitate Cryo-EM Visualization of Membrane Vesicles.
  J Am Chem Soc Volume: 146 Page(s): 12925 - 12932
  05/15/2024 Authors: Aissaoui N; Mills A; Lai-Kee-Him J; Triomphe N; Cece Q; Doucet C; Bonhoure A; Vidal M; Ke Y; Bellot G
• Mechanism of DNA origami folding elucidated by mesoscopic simulations.
  Nat Commun Volume: 15 Page(s): 3015
  04/08/2024 Authors: DeLuca M; Duke D; Ye T; Poirier M; Ke Y; Castro C; Arya G
• DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes.
  Nano Lett Volume: 24 Page(s): 1703 - 1709
  02/07/2024 Authors: Lu Q; Xu Y; Poppleton E; Zhou K; Sulc P; Stephanopoulos N; Ke Y
• Controlling Silicification on DNA Origami with Polynucleotide Brushes.
  J Am Chem Soc Volume: 146 Page(s): 358 - 367
  01/10/2024 Authors: Wang S; Lin P-A; DeLuca M; Zauscher S; Arya G; Ke Y
• Spatiotemporal Control over Polynucleotide Brush Growth on DNA Origami Nanostructures.
  Angew Chem Int Ed Engl Volume: 62 Page(s): e202311727
  11/27/2023 Authors: Yang Y; Lu Q; Chen Y; DeLuca M; Arya G; Ke Y; Zauscher S
• Detection of cellular traction forces via the force-triggered Cas12a-mediated catalytic cleavage of a fluorogenic reporter strand.
  Nat Biomed Eng Volume: 7 Page(s): 1404 - 1418
  11/01/2023 Authors: Duan Y; Szlam F; Hu Y; Chen W; Li R; Ke Y; Sniecinski R; Salaita K
• A Spatially Programmable DNA Nanorobot Arm to Modulate Anisotropic Gold Nanoparticle Assembly by Enzymatic Excision.
  Angew Chem Int Ed Engl Volume: 62 Page(s): e202308797
  10/23/2023 Authors: Yang J; Liang Y; Li X; Zhang Y; Qian L; Ke Y; Zhang C
• Circular single-stranded DNA as switchable vector for gene expression in mammalian cells.
  Nat Commun Volume: 14 Page(s): 6665
  10/20/2023 Authors: Tang L; Tian Z; Cheng J; Zhang Y; Song Y; Liu Y; Wang J; Zhang P; Ke Y; Simmel FC
• Building Large DNA Bundles via Controlled Hierarchical Assembly of DNA Tubes.
  ACS Nano Volume: 17 Page(s): 10486 - 10495
  06/13/2023 Authors: Zhang Y; Yang D; Wang P; Ke Y
• DNA origami-designed 3D phononic crystals.
  Nanophotonics Volume: 12 Page(s): 2611 - 2621
  06/01/2023 Authors: Park SH; Park H; Nam J-M; Ke Y; Liedl T; Tian Y; Lee S
• Recent Advances in DNA Origami-Engineered Nanomaterials and Applications.
  Chem Rev Volume: 123 Page(s): 3976 - 4050
  04/12/2023 Authors: Zhan P; Peil A; Jiang Q; Wang D; Mousavi S; Xiong Q; Shen Q; Shang Y; Ding B; Lin C
• Structure-Dependent Electrical Conductance of DNA Origami Nanowires.
  Chembiochem Volume: 24 Page(s): e202200454
  01/17/2023 Authors: Marrs J; Lu Q; Pan V; Ke Y; Hihath J
• A bistable and reconfigurable molecular system with encodable bonds.
  Sci Adv Volume: 8 Page(s): eade3003
  11/18/2022 Authors: Zhou C; Yang D; Sensale S; Sharma P; Wang D; Yu L; Arya G; Ke Y; Wang P
• Cooperative binding of T cell receptor and CD4 to peptide-MHC enhances antigen sensitivity.
  Nat Commun Volume: 13 Page(s): 7055
  11/17/2022 Authors: Rushdi MN; Pan V; Li K; Choi H-K; Travaglino S; Hong J; Griffitts F; Agnihotri P; Mariuzza RA; Ke Y
• Design of Uracil-Modified DNA Nanotubes for Targeted Drug Release via DNA-Modifying Enzyme Reactions.
  ACS Appl Mater Interfaces Volume: 14 Page(s): 34470 - 34479
  08/03/2022 Authors: Deng Y; Tan Y; Zhang Y; Zhang L; Zhang C; Ke Y; Su X
• Stress in DNA Gridiron Facilitates the Formation of Two-Dimensional Crystalline Structures.
  J Am Chem Soc Volume: 144 Page(s): 9747 - 9752
  06/08/2022 Authors: Yu L; Cheng J; Wang D; Pan V; Chang S; Song J; Ke Y
• DNA Assembly of Modular Components into a Rotary Nanodevice.
  ACS Nano Volume: 16 Page(s): 5284 - 5291
  04/26/2022 Authors: Peil A; Xin L; Both S; Shen L; Ke Y; Weiss T; Zhan P; Liu N
• Spatiotemporal Control of Molecular Cascade Reactions by a Reconfigurable DNA Origami Domino Array.
  Angew Chem Int Ed Engl Volume: 61 Page(s): e202116324
  02/21/2022 Authors: Fan S; Ji B; Liu Y; Zou K; Tian Z; Dai B; Cui D; Zhang P; Ke Y; Song J
• Programmable allosteric DNA regulations for molecular networks and nanomachines.
  Sci Adv Volume: 8 Page(s): eabl4589
  02/04/2022 Authors: Zhang C; Ma X; Zheng X; Ke Y; Chen K; Liu D; Lu Z; Yang J; Yan H
• Shaped DNA origami carrier nanopore translocation influenced by aptamer based surface modification.
  Biosens Bioelectron Volume: 195 Page(s): 113658
  01/01/2022 Authors: Ding T; Yang J; Wang J; Pan V; Lu Z; Ke Y; Zhang C
• Divalent Multilinking Bonds Control Growth and Morphology of Nanopolymers.
  Nano Lett Volume: 21 Page(s): 10547 - 10554
  12/22/2021 Authors: Xiong Y; Lin Z; Mostarac D; Minevich B; Peng Q; Zhu G; Snchez PA; Kantorovich S; Ke Y; Gang O
• Blockade of glutamine-dependent cell survival augments antitumor efficacy of CPI-613 in head and neck cancer.
  J Exp Clin Cancer Res Volume: 40 Page(s): 393
  12/14/2021 Authors: Lang L; Wang F; Ding Z; Zhao X; Loveless R; Xie J; Shay C; Qiu P; Ke Y; Saba NF
• Massively Parallelized Molecular Force Manipulation with On-Demand Thermal and Optical Control.
  J Am Chem Soc Volume: 143 Page(s): 19466 - 19473
  11/24/2021 Authors: Su H; Brockman JM; Duan Y; Sen N; Chhabra H; Bazrafshan A; Blanchard AT; Meyer T; Andrews B; Doye JPK
• Monochromatic Fluorescent Barcodes Hierarchically Assembled from Modular DNA Origami Nanorods.
  ACS Nano Volume: 15 Page(s): 15892 - 15901
  10/26/2021 Authors: Pan V; Wang W; Heaven I; Bai T; Cheng Y; Chen C; Ke Y; Wei B
• Programmable Site-Specific Functionalization of DNA Origami with Polynucleotide Brushes.
  Angew Chem Int Ed Engl Volume: 60 Page(s): 23241 - 23247
  10/18/2021 Authors: Yang Y; Lu Q; Huang C-M; Qian H; Zhang Y; Deshpande S; Arya G; Ke Y; Zauscher S
• An Indestructible Tension Probe for Measuring High-Force Mechanical Events in Cells
  Volume: 30 Page(s): 123 - 123
  10/01/2021 Authors: Bender R; Duan Y; Kellner A; Deal B; Ogasawara H; Heemstra J; Ke Y; Salaita K
• Mechanically Triggered Hybridization Chain Reaction.
  Angew Chem Int Ed Engl Volume: 60 Page(s): 19974 - 19981
  09/01/2021 Authors: Duan Y; Glazier R; Bazrafshan A; Hu Y; Rashid SA; Petrich BG; Ke Y; Salaita K
• DNA Nanotechnology-Based Biosensors and Therapeutics.
  Adv Healthc Mater Volume: 10 Page(s): e2002205
  08/01/2021 Authors: Shen L; Wang P; Ke Y
• DNA-Grafted 3D Superlattice Self-Assembly.
  Int J Mol Sci Volume: 22
  07/15/2021 Authors: Wang S; Xie X; Chen Z; Ma N; Zhang X; Li K; Teng C; Ke Y; Tian Y
• DNA origami single crystals with Wulff shapes.
  Nat Commun Volume: 12 Page(s): 3011
  05/21/2021 Authors: Wang Y; Dai L; Ding Z; Ji M; Liu J; Xing H; Liu X; Ke Y; Fan C; Wang P
• Accurate genotyping of fragmented DNA using a toehold assisted padlock probe.
  Biosens Bioelectron Volume: 179 Page(s): 113079
  05/01/2021 Authors: Gao Y; Qiao H; Pan V; Wang Z; Li J; Wei Y; Ke Y; Qi H
• Programmable Transformations of DNA Origami Made of Small Modular Dynamic Units.
  J Am Chem Soc Volume: 143 Page(s): 2256 - 2263
  02/10/2021 Authors: Wang D; Yu L; Huang C-M; Arya G; Chang S; Ke Y
• Hierarchical Fabrication of DNA Wireframe Nanoarchitectures for Efficient Cancer Imaging and Targeted Therapy.
  ACS Nano Volume: 14 Page(s): 17365 - 17375
  12/22/2020 Authors: Wang D; Peng R; Peng Y; Deng Z; Xu F; Su Y; Wang P; Li L; Wang X-Q; Ke Y
• Low-Bias Manipulation of DNA Oligo Pool for Robust Data Storage.
  ACS Synth Biol Volume: 9 Page(s): 3344 - 3352
  12/18/2020 Authors: Gao Y; Chen X; Qiao H; Ke Y; Qi H
• Modular Reconfigurable DNA Origami: From Two-Dimensional to Three-Dimensional Structures.
  Angew Chem Int Ed Engl Volume: 59 Page(s): 23277 - 23282
  12/14/2020 Authors: Liu Y; Cheng J; Fan S; Ge H; Luo T; Tang L; Ji B; Zhang C; Cui D; Ke Y
• DNA Origami Guided Self-Assembly of Plasmonic Polymers with Robust Long-Range Plasmonic Resonance.
  Nano Lett Volume: 20 Page(s): 8926 - 8932
  12/09/2020 Authors: Wang P; Huh J-H; Park H; Yang D; Zhang Y; Zhang Y; Lee J; Lee S; Ke Y
• DNA Origami-Enabled Biosensors.
  Sensors (Basel) Volume: 20
  12/03/2020 Authors: Wang S; Zhou Z; Ma N; Yang S; Li K; Teng C; Ke Y; Tian Y
• Programming the Curvatures in Reconfigurable DNA Domino Origami by Using Asymmetric Units.
  Nano Lett Volume: 20 Page(s): 8236 - 8241
  11/11/2020 Authors: Wang D; Yu L; Ji B; Chang S; Song J; Ke Y
• Engineering Organization of DNA Nano-Chambers through Dimensionally Controlled and Multi-Sequence Encoded Differentiated Bonds.
  J Am Chem Soc Volume: 142 Page(s): 17531 - 17542
  10/14/2020 Authors: Lin Z; Emamy H; Minevich B; Xiong Y; Xiang S; Kumar S; Ke Y; Gang O
• Interfacially Bridging Covalent Network Yields Hyperstable and Ultralong Virus-Based Fibers for Engineering Functional Materials.
  Angew Chem Int Ed Engl Volume: 59 Page(s): 18249 - 18255
  10/05/2020 Authors: Zhou K; Zhou Y; Yang H; Jin H; Ke Y; Wang Q
• Live-cell super-resolved PAINT imaging of piconewton cellular traction forces.
  Nat Methods Volume: 17 Page(s): 1018 - 1024
  10/01/2020 Authors: Brockman JM; Su H; Blanchard AT; Duan Y; Meyer T; Quach ME; Glazier R; Bazrafshan A; Bender RL; Kellner AV
• Proximity-Induced Pattern Operations in Reconfigurable DNA Origami Domino Array.
  J Am Chem Soc Volume: 142 Page(s): 14566 - 14573
  08/26/2020 Authors: Fan S; Cheng J; Liu Y; Wang D; Luo T; Dai B; Zhang C; Cui D; Ke Y; Song J
• Programmable assembly of gold nanoparticle nanoclusters and lattices.
  J Mater Chem B Volume: 8 Page(s): 6810 - 6813
  08/21/2020 Authors: Shen L; Pan V; Li H; Zhang Y; Wang P; Ke Y
• Information Coding in a Reconfigurable DNA Origami Domino Array.
  Angew Chem Int Ed Engl Volume: 59 Page(s): 12991 - 12997
  07/27/2020 Authors: Fan S; Wang D; Cheng J; Liu Y; Luo T; Cui D; Ke Y; Song J
• Corrigendum: Systemic Delivery of Bc12-Targeting siRNA by DNA Nanoparticles Suppresses Cancer Cell Growth.
  Angew Chem Int Ed Engl Volume: 59 Page(s): 12575
  07/27/2020 Authors: Rahman MA; Wang P; Zhao Z; Wang D; Nannapaneni S; Zhang C; Chen Z; Griffith CC; Hurwitz SJ; Chen ZG
• Tunable DNA Origami Motors Translocate Ballistically Over m Distances at nm/s Speeds.
  Angew Chem Int Ed Engl Volume: 59 Page(s): 9514 - 9521
  06/08/2020 Authors: Bazrafshan A; Meyer TA; Su H; Brockman JM; Blanchard AT; Piranej S; Duan Y; Ke Y; Salaita K
• Programming the Nucleation of DNA Brick Self-Assembly with a Seeding Strand.
  Angew Chem Int Ed Engl Volume: 59 Page(s): 8594 - 8600
  05/25/2020 Authors: Zhang Y; Reinhardt A; Wang P; Song J; Ke Y
• Programming Surface-Enhanced Raman Scattering of DNA Origami-templated Metamolecules.
  Nano Lett Volume: 20 Page(s): 3155 - 3159
  05/13/2020 Authors: Zhou C; Yang Y; Li H; Gao F; Song C; Yang D; Xu F; Liu N; Ke Y; Su S
• Programmable Assembly of Iron Oxide Nanoparticles Using DNA Origami.
  Nano Lett Volume: 20 Page(s): 2799 - 2805
  04/08/2020 Authors: Meyer TA; Zhang C; Bao G; Ke Y
• DNA nanotechnology assisted nanopore-based analysis.
  Nucleic Acids Res Volume: 48 Page(s): 2791 - 2806
  04/06/2020 Authors: Ding T; Yang J; Pan V; Zhao N; Lu Z; Ke Y; Zhang C
• Programming Dynamic Assembly of Viral Proteins with DNA Origami.
  J Am Chem Soc Volume: 142 Page(s): 5929 - 5932
  04/01/2020 Authors: Zhou K; Zhou Y; Pan V; Wang Q; Ke Y
• Polymer Force Clamps for the Mechanical Unfolding of Target Molecules
  Volume: 118 Page(s): 349A - 349A
  02/07/2020 Authors: Su H; Brockman J; Blanchard A; Meyer T; Duan Y; Liu Z; Zhao J; Liu Y; Ma VP-Y; Galior K
• Highly Processive DNA Origami Nanoscale Motors
  Volume: 118 Page(s): 479A - 479A
  02/07/2020 Authors: Bazrafshan A; Meyer T; Su H; Brockman J; Piranej S; Blanchard A; Salaita K; Ke Y
• Super-resolved Measurement of Piconewton Receptor Forces via Tension-PAINT
  Volume: 118 Page(s): 284A - 285A
  02/07/2020 Authors: Brockman JM; Su H; Mattheyses AL; Ke Y; Salaita K
• RNA imaging in living mice enabled by an in vivo hybridization chain reaction circuit with a tripartite DNA probe.
  Chem Sci Volume: 11 Page(s): 62 - 69
  01/07/2020 Authors: Wu H; Chen T-T; Wang X-N; Ke Y; Jiang J-H
• Electrostatic Complementarity Drives Amyloid/Nucleic Acid Co-Assembly.
  Angew Chem Int Ed Engl Volume: 59 Page(s): 358 - 363
  01/02/2020 Authors: Rha AK; Das D; Taran O; Ke Y; Mehta AK; Lynn DG
• Programming DNA Tube Circumference by Tile Offset Connection.
  J Am Chem Soc Volume: 141 Page(s): 19529 - 19532
  12/18/2019 Authors: Zhang Y; Chen X; Kang G; Peng R; Pan V; Sundaresan R; Wang P; Ke Y
• Nicking-Assisted Reactant Recycle To Implement Entropy-Driven DNA Circuit.
  J Am Chem Soc Volume: 141 Page(s): 17189 - 17197
  10/30/2019 Authors: Zhang C; Wang Z; Liu Y; Yang J; Zhang X; Li Y; Pan L; Ke Y; Yan H
• Self-Assembly of DNA-Minocycline Complexes by Metal Ions with Controlled Drug Release.
  ACS Appl Mater Interfaces Volume: 11 Page(s): 29512 - 29521
  08/21/2019 Authors: Zhang T; Nong J; Alzahrani N; Wang Z; Oh SW; Meier T; Yang DG; Ke Y; Zhong Y; Fu J
• Hierarchical Self-Assembly of Cholesterol-DNA Nanorods.
  Bioconjug Chem Volume: 30 Page(s): 1845 - 1849
  07/17/2019 Authors: Zhang Y; Peng R; Xu F; Ke Y
• Magnetic Plasmon Networks Programmed by Molecular Self-Assembly.
  Adv Mater Volume: 31 Page(s): e1901364
  07/01/2019 Authors: Wang P; Huh J-H; Lee J; Kim K; Park KJ; Lee S; Ke Y
• RNA-based nanostructures for therapeutic siRNA delivery
  Volume: 79
  07/01/2019 Authors: Ke Y; Shin D; Chen G
• Biomimetic Compartments Scaffolded by Nucleic Acid Nanostructures.
  Small Volume: 15 Page(s): e1900256
  06/01/2019 Authors: Fu J; Oh SW; Monckton K; Arbuckle-Keil G; Ke Y; Zhang T
• Dynamic DNA Structures.
  Small Volume: 15 Page(s): e1900228
  06/01/2019 Authors: Zhang Y; Pan V; Li X; Yang X; Li H; Wang P; Ke Y
• Complex self-assembly and transformation of DNA nanostructures
  Volume: 37 Page(s): 11 - 11
  05/10/2019 Authors: Ke Y
• Complex wireframe DNA nanostructures from simple building blocks.
  Nat Commun Volume: 10 Page(s): 1067
  03/06/2019 Authors: Wang W; Chen S; An B; Huang K; Bai T; Xu M; Bellot G; Ke Y; Xiang Y; Wei B
• Attack on the Cell Membrane: The Pointy Ends of DNA Nanostructures Lead the Way.
  ACS Cent Sci Volume: 4 Page(s): 1298 - 1299
  10/24/2018 Authors: Wang P; Ke Y
• Design and operation of reconfigurable two-dimensional DNA molecular arrays.
  Nat Protoc Volume: 13 Page(s): 2312 - 2329
  10/01/2018 Authors: Wang D; Song J; Wang P; Pan V; Zhang Y; Cui D; Ke Y
• Programmable Multivalent DNA-Origami Tension Probes for Reporting Cellular Traction Forces.
  Nano Lett Volume: 18 Page(s): 4803 - 4811
  08/08/2018 Authors: Dutta PK; Zhang Y; Blanchard AT; Ge C; Rushdi M; Weiss K; Zhu C; Ke Y; Salaita K
• Advanced Cell and Tissue Biomanufacturing.
  ACS Biomater Sci Eng Volume: 4 Page(s): 2292 - 2307
  07/09/2018 Authors: Ye K; Kaplan DL; Bao G; Bettinger C; Forgacs G; Dong C; Khademhosseini A; Ke Y; Leong K; Sambanis A
• Selective in Situ Assembly of Viral Protein onto DNA Origami.
  J Am Chem Soc Volume: 140 Page(s): 8074 - 8077
  07/05/2018 Authors: Zhou K; Ke Y; Wang Q
• Structural DNA Nanotechnology: Artificial Nanostructures for Biomedical Research.
  Annu Rev Biomed Eng Volume: 20 Page(s): 375 - 401
  06/04/2018 Authors: Ke Y; Castro C; Choi JH
• Visualization of the Cellular Uptake and Trafficking of DNA Origami Nanostructures in Cancer Cells.
  J Am Chem Soc Volume: 140 Page(s): 2478 - 2484
  02/21/2018 Authors: Wang P; Rahman MA; Zhao Z; Weiss K; Zhang C; Chen Z; Hurwitz SJ; Chen ZG; Shin DM; Ke Y
• Systemic Delivery of Bc12-Targeting siRNA by DNA Nanoparticles Suppresses Cancer Cell Growth.
  Angew Chem Int Ed Engl Volume: 56 Page(s): 16023 - 16027
  12/11/2017 Authors: Rahman MA; Wang P; Zhao Z; Wang D; Nannapaneni S; Zhang C; Chen Z; Griffith CC; Hurwitz SJ; Chen ZG
• Programmable self-assembly of three-dimensional nanostructures from 10,000 unique components.
  Nature Volume: 552 Page(s): 72 - 77
  12/06/2017 Authors: Ong LL; Hanikel N; Yaghi OK; Grun C; Strauss MT; Bron P; Lai-Kee-Him J; Schueder F; Wang B; Wang P
• Programmable Supra-Assembly of a DNA Surface Adapter for Tunable Chiral Directional Self-Assembly of Gold Nanorods.
  Angew Chem Int Ed Engl Volume: 56 Page(s): 14632 - 14636
  11/13/2017 Authors: Lan X; Su Z; Zhou Y; Meyer T; Ke Y; Wang Q; Chiu W; Liu N; Zou S; Yan H
• Structurally Ordered Nanowire Formation from Co-Assembly of DNA Origami and Collagen-Mimetic Peptides.
  J Am Chem Soc Volume: 139 Page(s): 14025 - 14028
  10/11/2017 Authors: Jiang T; Meyer TA; Modlin C; Zuo X; Conticello VP; Ke Y
• Angular reconstitution-based 3D reconstructions of nanomolecular structures from superresolution light-microscopy images.
  Proc Natl Acad Sci U S A Volume: 114 Page(s): 9273 - 9278
  08/29/2017 Authors: Salas D; Le Gall A; Fiche J-B; Valeri A; Ke Y; Bron P; Bellot G; Nollmann M
• Reconfiguration of DNA molecular arrays driven by information relay.
  Science Volume: 357
  07/28/2017 Authors: Song J; Li Z; Wang P; Meyer T; Mao C; Ke Y
• Reconfigurable Three-Dimensional Gold Nanorod Plasmonic Nanostructures Organized on DNA Origami Tripod.
  ACS Nano Volume: 11 Page(s): 1172 - 1179
  02/28/2017 Authors: Zhan P; Dutta PK; Wang P; Song G; Dai M; Zhao S-X; Wang Z-G; Yin P; Zhang W; Ding B
• Complex DNA Brick Assembly.
  Methods Mol Biol Volume: 1500 Page(s): 41 - 49
  01/01/2017 Authors: Ong LL; Ke Y
• Erratum.
  Methods Mol Biol Volume: 1500 Page(s): E1 - E4
  01/01/2017 Authors: Ke Y; Wang P
• 3D DNA Nanostructure Methods and Protocols Preface
  Volume: 1500 Page(s): V - V
  01/01/2017 Authors: Ke Y; Wang P
• Programming Self-Assembly of DNA Origami Honeycomb Two-Dimensional Lattices and Plasmonic Metamaterials.
  J Am Chem Soc Volume: 138 Page(s): 7733 - 7740
  06/22/2016 Authors: Wang P; Gaitanaros S; Lee S; Bathe M; Shih WM; Ke Y
• Programmable DNA Hydrogels Assembled from Multidomain DNA Strands.
  Chembiochem Volume: 17 Page(s): 1156 - 1162
  06/16/2016 Authors: Jiang H; Pan V; Vivek S; Weeks ER; Ke Y
• Plasmonic Toroidal Metamolecules Assembled by DNA Origami.
  J Am Chem Soc Volume: 138 Page(s): 5495 - 5498
  05/04/2016 Authors: Urban MJ; Dutta PK; Wang P; Duan X; Shen X; Ding B; Ke Y; Liu N
• Regulation at a distance of biomolecular interactions using a DNA origami nanoactuator.
  Nat Commun Volume: 7 Page(s): 10935
  03/18/2016 Authors: Ke Y; Meyer T; Shih WM; Bellot G
• Site-Specific Surface Functionalization of Gold Nanorods Using DNA Origami Clamps.
  J Am Chem Soc Volume: 138 Page(s): 1764 - 1767
  02/17/2016 Authors: Shen C; Lan X; Lu X; Meyer TA; Ni W; Ke Y; Wang Q
• Prescribed nanoparticle cluster architectures and low-dimensional arrays built using octahedral DNA origami frames.
  Nat Nanotechnol Volume: 10 Page(s): 637 - 644
  07/01/2015 Authors: Tian Y; Wang T; Liu W; Xin HL; Li H; Ke Y; Shih WM; Gang O
• Au nanorod helical superstructures with designed chirality.
  J Am Chem Soc Volume: 137 Page(s): 457 - 462
  01/14/2015 Authors: Lan X; Lu X; Shen C; Ke Y; Ni W; Wang Q
• DNA brick crystals with prescribed depths.
  Nat Chem Volume: 6 Page(s): 994 - 1002
  11/01/2014 Authors: Ke Y; Ong LL; Sun W; Song J; Dong M; Shih WM; Yin P
• Designer three-dimensional DNA architectures.
  Curr Opin Struct Biol Volume: 27 Page(s): 122 - 128
  08/01/2014 Authors: Ke Y
• DNA origami structures directly assembled from intact bacteriophages.
  Small Volume: 10 Page(s): 1765 - 1769
  05/14/2014 Authors: Nickels PC; Ke Y; Jungmann R; Smith DM; Leichsenring M; Shih WM; Liedl T; Hgberg B
• Polyhedra self-assembled from DNA tripods and characterized with 3D DNA-PAINT.
  Science Volume: 344 Page(s): 65 - 69
  04/04/2014 Authors: Iinuma R; Ke Y; Jungmann R; Schlichthaerle T; Woehrstein JB; Yin P
• Design space for complex DNA structures.
  J Am Chem Soc Volume: 135 Page(s): 18080 - 18088
  12/04/2013 Authors: Wei B; Dai M; Myhrvold C; Ke Y; Jungmann R; Yin P
• Metallized DNA nanolithography for encoding and transferring spatial information for graphene patterning.
  Nat Commun Volume: 4 Page(s): 1663
  01/01/2013 Authors: Jin Z; Sun W; Ke Y; Shih C-J; Paulus GLC; Hua Wang Q; Mu B; Yin P; Strano MS
• Three-dimensional structures self-assembled from DNA bricks.
  Science Volume: 338 Page(s): 1177 - 1183
  11/30/2012 Authors: Ke Y; Ong LL; Shih WM; Yin P
• Two design strategies for enhancement of multilayer-DNA-origami folding: underwinding for specific intercalator rescue and staple-break positioning.
  Chem Sci Volume: 3 Page(s): 2587 - 2597
  08/01/2012 Authors: Ke Y; Bellot G; Voigt NV; Fradkov E; Shih WM
• Multilayer DNA origami packed on hexagonal and hybrid lattices.
  J Am Chem Soc Volume: 134 Page(s): 1770 - 1774
  01/25/2012 Authors: Ke Y; Voigt NV; Gothelf KV; Shih WM
• Synthesis and characterization of self-assembled DNA nanostructures.
  Volume: 749 Page(s): 1 - 11
  01/01/2011 Authors: Lin C; Ke Y; Chhabra R; Sharma J; Liu Y; Yan H
• Multilayer DNA origami packed on a square lattice.
  J Am Chem Soc Volume: 131 Page(s): 15903 - 15908
  11/04/2009 Authors: Ke Y; Douglas SM; Liu M; Sharma J; Cheng A; Leung A; Liu Y; Shih WM; Yan H
• Controlled delivery of DNA origami on patterned surfaces.
  Small Volume: 5 Page(s): 1942 - 1946
  09/01/2009 Authors: Gerdon AE; Oh SS; Hsieh K; Ke Y; Yan H; Soh HT
• Scaffolded DNA origami of a DNA tetrahedron molecular container.
  Nano Lett Volume: 9 Page(s): 2445 - 2447
  06/01/2009 Authors: Ke Y; Sharma J; Liu M; Jahn K; Liu Y; Yan H
• Mirror image DNA nanostructures for chiral supramolecular assemblies.
  Nano Lett Volume: 9 Page(s): 433 - 436
  01/01/2009 Authors: Lin C; Ke Y; Li Z; Wang JH; Liu Y; Yan H
• Developing DNA tiles for oligonucleotide hybridization assay with higher accuracy and efficiency.
  Chem Commun (Camb) Page(s): 5622 - 5624
  11/21/2008 Authors: Ke Y; Nangreave J; Yan H; Lindsay S; Liu Y
• Subtractive assembly of DNA nanoarchitectures driven by fuel strand displacement.
  Chem Commun (Camb) Page(s): 4318 - 4320
  09/28/2008 Authors: Li Z; Ke Y; Lin C; Yan H; Liu Y
• Self-assembled DNA nanostructures for distance-dependent multivalent ligand-protein binding.
  Nat Nanotechnol Volume: 3 Page(s): 418 - 422
  07/01/2008 Authors: Rinker S; Ke Y; Liu Y; Chhabra R; Yan H
• Self-assembled water-soluble nucleic acid probe tiles for label-free RNA hybridization assays.
  Science Volume: 319 Page(s): 180 - 183
  01/11/2008 Authors: Ke Y; Lindsay S; Chang Y; Liu Y; Yan H
• DNA-tile-directed self-assembly of quantum dots into two-dimensional nanopatterns.
  Angew Chem Int Ed Engl Volume: 47 Page(s): 5157 - 5159
  01/01/2008 Authors: Sharma J; Ke Y; Lin C; Chhabra R; Wang Q; Nangreave J; Liu Y; Yan H
• Quantum dot bioconjugation during core-shell synthesis.
  Angew Chem Int Ed Engl Volume: 47 Page(s): 316 - 319
  01/01/2008 Authors: Wang Q; Liu Y; Ke Y; Yan H
• Spatially addressable multiprotein nanoarrays templated by aptamer-tagged DNA nanoarchitectures.
  J Am Chem Soc Volume: 129 Page(s): 10304 - 10305
  08/29/2007 Authors: Chhabra R; Sharma J; Ke Y; Liu Y; Rinker S; Lindsay S; Yan H
• Functional DNA nanotube arrays: bottom-up meets top-down.
  Angew Chem Int Ed Engl Volume: 46 Page(s): 6089 - 6092
  01/01/2007 Authors: Lin C; Ke Y; Liu Y; Mertig M; Gu J; Yan H
• A study of DNA tube formation mechanisms using 4-, 8-, and 12-helix DNA nanostructures.
  J Am Chem Soc Volume: 128 Page(s): 4414 - 4421
  04/05/2006 Authors: Ke Y; Liu Y; Zhang J; Yan H
• Periodic square-like gold nanoparticle arrays templated by self-assembled 2D DNA Nanogrids on a surface.
  Nano Lett Volume: 6 Page(s): 248 - 251
  02/01/2006 Authors: Zhang J; Liu Y; Ke Y; Yan H
• DNA-templated self-assembly of two-dimensional and periodical gold nanoparticle arrays.
  Angew Chem Int Ed Engl Volume: 45 Page(s): 730 - 735
  01/23/2006 Authors: Sharma J; Chhabra R; Liu Y; Ke Y; Yan H
• Self-assembly of symmetric finite-size DNA nanoarrays.
  J Am Chem Soc Volume: 127 Page(s): 17140 - 17141
  12/14/2005 Authors: Liu Y; Ke Y; Yan H