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Profile

Xu Liu

  • Department of Biochemistry
    Assistant Professor
  • xu.liu@emory.edu
Head shot of Xu Liu

Overview

Xu received a B.S. in food science and engineering from Shandong Normal University in 2005 and M.S. in biochemistry from Beijing Normal University in China in 2008. He finished his PhD studies centered on PDZ domain-mediated protein/ligand interactions in University of Iowa in 2014. He then performed a short-term postdoctoral research in structure and inhibition of a histone demethylase family in Cheng lab in Emory University before he joined Ortlund lab in 2016. Here he focuses on investigating the structure-dynamics-function relationship of glucocorticoid receptor and an acyltransferase called tafazzin.

Academic Appointment

  • Assistant Professor, Biochemistry, Emory University School of Medicine

Research

Publications

  • Activity and phosphatidylcholine transfer protein interactions of skeletal muscle thioesterase Them2 enable hepatic steatosis and insulin resistance.
    J Biol Chem Volume: 300 Page(s): 107855
    11/01/2024 Authors: Xie Y; Liu X; Liu W; Carr LR; Lee LP; Imai N; Ortlund EA; Cohen DE
  • Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
    Nat Commun Volume: 15 Page(s): 5123
    06/15/2024 Authors: Sastre DE; Sultana N; V A S Navarro M; Huliciak M; Du J; Cifuente JO; Flowers M; Liu X; Lollar P; Trastoy B
  • Evolution of androgen receptors contributes to species variation in androgenic regulation of communication signals in electric fishes.
    Mol Cell Endocrinol Volume: 578 Page(s): 112068
    12/01/2023 Authors: Proffitt MR; Liu X; Ortlund EA; Smith GT
  • High-throughput screening identifies small molecule inhibitors of thioesterase superfamily member 1: Implications for the management of non-alcoholic fatty liver disease.
    Mol Metab Volume: 78 Page(s): 101832
    12/01/2023 Authors: Krumm CS; Landzberg RS; Ramos-Espiritu L; Adura C; Liu X; Acuna M; Xie Y; Xu X; Tillman MC; Li Y
  • DNA-PK is activated by SIRT2 deacetylation to promote DNA double-strand break repair by non-homologous end joining.
    Nucleic Acids Res Volume: 51 Page(s): 7972 - 7987
    08/25/2023 Authors: Head PE; Kapoor-Vazirani P; Nagaraju GP; Zhang H; Rath SK; Luong NC; Haji-Seyed-Javadi R; Sesay F; Wang S-Y; Duong DM
  • SAMHD1 deacetylation by SIRT1 promotes DNA end resection by facilitating DNA binding at double-strand breaks.
    Nat Commun Volume: 13 Page(s): 6707
    11/07/2022 Authors: Kapoor-Vazirani P; Rath SK; Liu X; Shu Z; Bowen NE; Chen Y; Haji-Seyed-Javadi R; Daddacha W; Minten EV; Danelia D
  • Deep mutational scanning identifies SARS-CoV-2 Nucleocapsid escape mutations of currently available rapid antigen tests.
    Cell Volume: 185 Page(s): 3603 - 3616.e13
    09/15/2022 Authors: Frank F; Keen MM; Rao A; Bassit L; Liu X; Bowers HB; Patel AB; Cato ML; Sullivan JA; Greenleaf M
  • A phospholipid mimetic targeting LRH-1 ameliorates colitis.
    Cell Chem Biol Volume: 29 Page(s): 1174 - 1186.e7
    07/21/2022 Authors: Mays SG; D'Agostino EH; Flynn AR; Huang X; Wang G; Liu X; Millings EJ; Okafor CD; Patel A; Cato ML
  • Structural insights into glucocorticoid receptor function.
    Biochem Soc Trans Volume: 49 Page(s): 2333 - 2343
    11/01/2021 Authors: Frank F; Ortlund EA; Liu X
  • Structural basis for glucocorticoid receptor recognition of both unmodified and methylated binding sites, precursors of a modern recognition element.
    Nucleic Acids Res Volume: 49 Page(s): 8923 - 8933
    09/07/2021 Authors: Liu X; Weikum ER; Tilo D; Vinson C; Ortlund EA
  • Glucocorticoid receptor condensates link DNA-dependent receptor dimerization and transcriptional transactivation.
    Proc Natl Acad Sci U S A Volume: 118
    07/27/2021 Authors: Frank F; Liu X; Ortlund EA
  • Chemical systems biology reveals mechanisms of glucocorticoid receptor signaling.
    Nat Chem Biol Volume: 17 Page(s): 307 - 316
    03/01/2021 Authors: Bruno NE; Nwachukwu JC; Srinivasan S; Nettles CC; Izard T; Jin Z; Nowak J; Cameron MD; Boregowda SV; Phinney DG
  • Enantiomer-specific activities of an LRH-1 and SF-1 dual agonist.
    Sci Rep Volume: 10 Page(s): 22279
    12/17/2020 Authors: Mays SG; Stec J; Liu X; D'Agostino EH; Whitby RJ; Ortlund EA
  • Disruption of a key ligand-H-bond network drives dissociative properties in vamorolone for Duchenne muscular dystrophy treatment.
    Proc Natl Acad Sci U S A Volume: 117 Page(s): 24285 - 24293
    09/29/2020 Authors: Liu X; Wang Y; Gutierrez JS; Damsker JM; Nagaraju K; Hoffman EP; Ortlund EA
  • Proline-Rich Acidic Protein 1 (PRAP1) Protects the Gastrointestinal Epithelium From Irradiation-Induced Apoptosis.
    Cell Mol Gastroenterol Hepatol Volume: 10 Page(s): 713 - 727
    01/01/2020 Authors: Wolfarth AA; Liu X; Darby TM; Boyer DJ; Spizman JB; Owens JA; Chandrasekharan B; Naudin CR; Hanley KZ; Robinson BS
  • First High-Resolution Crystal Structures of the Glucocorticoid Receptor Ligand-Binding Domain-Peroxisome Proliferator-Activated Coactivator 1- Complex with Endogenous and Synthetic Glucocorticoids.
    Mol Pharmacol Volume: 96 Page(s): 408 - 417
    10/01/2019 Authors: Liu X; Wang Y; Ortlund EA
  • Conformational Dynamics and Cooperativity Drive the Specificity of a Protein-Ligand Interaction.
    Biophys J Volume: 116 Page(s): 2314 - 2330
    06/18/2019 Authors: Liu X; Golden LC; Lopez JA; Shepherd TR; Yu L; Fuentes EJ
  • Emerging Themes in PDZ Domain Signaling: Structure, Function, and Inhibition.
    Int Rev Cell Mol Biol Volume: 343 Page(s): 129 - 218
    01/01/2019 Authors: Liu X; Fuentes EJ
  • Structure-Based Engineering of Irreversible Inhibitors against Histone Lysine Demethylase KDM5A.
    J Med Chem Volume: 61 Page(s): 10588 - 10601
    12/13/2018 Authors: Horton JR; Woodcock CB; Chen Q; Liu X; Zhang X; Shanks J; Rai G; Mott BT; Jansen DJ; Kales SC
  • The nuclear receptor superfamily: A structural perspective.
    Protein Sci Volume: 27 Page(s): 1876 - 1892
    11/01/2018 Authors: Weikum ER; Liu X; Ortlund EA
  • Insights into the Action of Inhibitor Enantiomers against Histone Lysine Demethylase 5A.
    J Med Chem Volume: 61 Page(s): 3193 - 3208
    04/12/2018 Authors: Horton JR; Liu X; Wu L; Zhang K; Shanks J; Zhang X; Rai G; Mott BT; Jansen DJ; Kales SC
  • ZNF830 mediates cancer chemoresistance through promoting homologous-recombination repair.
    Nucleic Acids Res Volume: 46 Page(s): 1266 - 1279
    02/16/2018 Authors: Chen G; Chen J; Qiao Y; Shi Y; Liu W; Zeng Q; Xie H; Shi X; Sun Y; Liu X
  • Distinct Roles for Conformational Dynamics in Protein-Ligand Interactions.
    Structure Volume: 24 Page(s): 2053 - 2066
    12/06/2016 Authors: Liu X; Speckhard DC; Shepherd TR; Sun YJ; Hengel SR; Yu L; Fowler CA; Gakhar L; Fuentes EJ
  • Structural Basis for KDM5A Histone Lysine Demethylase Inhibition by Diverse Compounds.
    Cell Chem Biol Volume: 23 Page(s): 769 - 781
    07/21/2016 Authors: Horton JR; Liu X; Gale M; Wu L; Shanks JR; Zhang X; Webber PJ; Bell JSK; Kales SC; Mott BT
  • Characterization of a Linked Jumonji Domain of the KDM5/JARID1 Family of Histone H3 Lysine 4 Demethylases.
    J Biol Chem Volume: 291 Page(s): 2631 - 2646
    02/05/2016 Authors: Horton JR; Engstrom A; Zoeller EL; Liu X; Shanks JR; Zhang X; Johns MA; Vertino PM; Fu H; Cheng X
  • The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics.
    Structure Volume: 21 Page(s): 342 - 354
    03/05/2013 Authors: Liu X; Shepherd TR; Murray AM; Xu Z; Fuentes EJ
  • The Tiam1 PDZ domain couples to Syndecan1 and promotes cell-matrix adhesion.
    J Mol Biol Volume: 398 Page(s): 730 - 746
    05/21/2010 Authors: Shepherd TR; Klaus SM; Liu X; Ramaswamy S; DeMali KA; Fuentes EJ
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