Publications

• Perceptual and technical barriers in sharing and formatting metadata accompanying omics studies.
  Cell Genom Page(s): 100845
  04/10/2025 Authors: Huang Y-N; Munteanu V; Love MI; Ronkowski CF; Deshpande D; Wong-Beringer A; Corbett-Detig R; Dimian M; Moore JH; Garmire LX
• A case of myxopapillary ependymoma with predominant giant cell morphology: A rare entity with comprehensive genomic profiling and review of literature.
  Neuropathology Volume: 45 Page(s): 13 - 19
  02/01/2025 Authors: Morales-Vargas B; Saad H; Refai D; Schniederjan M; Abdullaev Z; Aldape K; Abedalthagafi M
• Progress in personalized immunotherapy for patients with brain metastasis.
  NPJ Precis Oncol Volume: 9 Page(s): 31
  01/29/2025 Authors: Patel L; Kolundzic N; Abedalthagafi M
• A reference quality, fully annotated diploid genome from a Saudi individual.
  Sci Data Volume: 11 Page(s): 1278
  11/23/2024 Authors: Kulmanov M; Tawfiq R; Liu Y; Al Ali H; Abdelhakim M; Alarawi M; Aldakhil H; Alhattab D; Alsolme EA; Althagafi A
• Association between human leukocyte antigen alleles and COVID-19 disease severity.
  J Infect Public Health Volume: 17 Page(s): 102498
  09/01/2024 Authors: Hajeer A; Jawdat D; Massadeh S; Aljawini N; Abedalthagafi MS; Arabi YM; Alaamery M
• Packaging and containerization of computational methods.
  Nat Protoc Volume: 19 Page(s): 2529 - 2539
  09/01/2024 Authors: Alser M; Lawlor B; Abdill RJ; Waymost S; Ayyala R; Rajkumar N; LaPierre N; Brito J; Ribeiro-Dos-Santos AM; Almadhoun N
• The evolution of computational research in a data-centric world.
  Cell Volume: 187 Page(s): 4449 - 4457
  08/22/2024 Authors: Deshpande D; Chhugani K; Ramesh T; Pellegrini M; Shifman S; Abedalthagafi MS; Alqahtani S; Ye J; Liu XS; Leek JT
• Extracavitary primary effusion lymphoma presenting as a solitary brain mass.
  CNS Oncol Volume: 13 Page(s): 2357535
  06/06/2024 Authors: Javadi T; Morales B; Olson JJ; Kothari S; Zhang L; Abedalthagafi M
• Artificial intelligence in neuro-oncology: advances and challenges in brain tumor diagnosis, prognosis, and precision treatment.
  NPJ Precis Oncol Volume: 8 Page(s): 80
  03/29/2024 Authors: Khalighi S; Reddy K; Midya A; Pandav KB; Madabhushi A; Abedalthagafi M
• Fusing Peptide Epitopes for Advanced Multiplex Serological Testing for SARS-CoV-2 Antibody Detection.
  ACS Bio Med Chem Au Volume: 4 Page(s): 37 - 52
  02/21/2024 Authors: Aldoukhi AH; Bilalis P; Alhattab DM; Valle-Prez AU; Susapto HH; Prez-Pedroza R; Backhoff-Garca E; Alsawaf SM; Alshehri S; Boshah H
• CffDNA screening for Niemann-pick disease, type C1: a case series.
  Front Med (Lausanne) Volume: 11 Page(s): 1390693
  01/01/2024 Authors: Lau SA; Fawaz RI; Rigobello R; Bawazeer S; Alajaji NM; Faqeih E; Li Y; Feng Y; Xia F; Eng CM
• Analytical code sharing practices in biomedical research.
  PeerJ Comput Sci Volume: 10 Page(s): e2066
  01/01/2024 Authors: Sharma NK; Ayyala R; Deshpande D; Patel Y; Munteanu V; Ciorba D; Bostan V; Fiscutean A; Vahed M; Sarkar A
• Fabrication of a three-dimensional bone marrow niche-like acute myeloid Leukemia disease model by an automated and controlled process using a robotic multicellular bioprinting system.
  Biomater Res Volume: 27 Page(s): 111
  11/06/2023 Authors: Alhattab DM; Isaioglou I; Alshehri S; Khan ZN; Susapto HH; Li Y; Marghani Y; Alghuneim AA; Daz-Ra R; Abdelrahman S
• The Genomic Landscape of Colorectal Cancer in the Saudi Arabian Population Using a Comprehensive Genomic Panel.
  Diagnostics (Basel) Volume: 13
  09/19/2023 Authors: Alsolme E; Alqahtani S; Fageeh M; Barakeh D; Sharma NK; Mangul S; Robinson HA; Fathaddin A; Hauser CAE; Abedalthagafi M
• Retinoblastoma in Saudi Arabia-Genomic characterization of 172 cases at King Khaled Eye Specialist Hospital
  Volume: 33
  09/01/2023 Authors: AlMesfer S; Maktabi A; Deepak E; Liu Y; Hoehndorf R; Abedalthagafi M
• Analytical code sharing practices in biomedical research.
  bioRxiv
  08/07/2023 Authors: Sharma NK; Ayyala R; Deshpande D; Patel YM; Munteanu V; Ciorba D; Fiscutean A; Vahed M; Sarkar A; Guo R
• Rigorous benchmarking of T-cell receptor repertoire profiling methods for cancer RNA sequencing.
  Brief Bioinform Volume: 24
  07/20/2023 Authors: Peng K; Nowicki TS; Campbell K; Vahed M; Peng D; Meng Y; Nagareddy A; Huang Y-N; Karlsberg A; Miller Z
• Author Correction: GWAS and meta-analysis identifies 49 genetic variants underlying critical COVID-19.
  Nature Volume: 619 Page(s): E61
  07/01/2023 Authors: Pairo-Castineira E; Rawlik K; Bretherick AD; Qi T; Wu Y; Nassiri I; McConkey GA; Zechner M; Klaric L; Griffiths F
• Investigating the prevalence of pathogenic variants in Saudi Arabian patients with familial cancer using a multigene next generation sequencing panel.
  Oncotarget Volume: 14 Page(s): 580 - 594
  06/12/2023 Authors: AlHarbi M; Mobark NA; AlJabarat WAR; ElBardis H; AlSolme E; Hamdan AB; AlFakeeh AH; AlMushawah F; AlHarthi F; AlSharm AA
• GWAS and meta-analysis identifies 49 genetic variants underlying critical COVID-19.
  Nature Volume: 617 Page(s): 764 - 768
  05/01/2023 Authors: Pairo-Castineira E; Rawlik K; Bretherick AD; Qi T; Wu Y; Nassiri I; McConkey GA; Zechner M; Klaric L; Griffiths F
• Non-invasive prenatal testing: a revolutionary journey in prenatal testing.
  Front Med (Lausanne) Volume: 10 Page(s): 1265090
  01/01/2023 Authors: Abedalthagafi M; Bawazeer S; Fawaz RI; Heritage AM; Alajaji NM; Faqeih E
• Ameloblastic Fibrosarcoma of the Jaw: Case Report, Genetic Profiling, and Literature Review.
  Case Rep Oncol Volume: 16 Page(s): 1293 - 1299
  01/01/2023 Authors: Barakeh D; Alsolami A; Abedalthagafi M
• PERSONALIZED TREATMENT FOR MOLECULARLY HETEROGENEOUS DIFFUSE MIDLINE GLIOMA, H3 K27-ALTERED PAEDIATRIC CASE
  Volume: 69 Page(s): S616 - S616
  11/01/2022 Authors: Mobark N; Alharbi M; Bayoumi YS; Al Banyan A; Alnaqib ZG; Aljabarat WAR; Balbaid AAO; Abedalthagafi M
• MANAGEMENT OF CNS TUMOR WITH BCOR INTERNAL TANDEM DUPLICATION WITH MULTIMODALITIES THERAPY: SURGERY, INTENSIVE CHEMOTHERAPY, AND RADIATION
  Volume: 69 Page(s): S306 - S307
  11/01/2022 Authors: Mobark N; Alharbi M; Ballourah W; Alsultan A; Al Banyan A; Al Manjomi F; Alnaqib ZG; Alotabi F; Balbaid AAO; Abedalthagafi M
• Exome-wide association study to identify rare variants influencing COVID-19 outcomes: Results from the Host Genetics Initiative.
  PLoS Genet Volume: 18 Page(s): e1010367
  11/01/2022 Authors: Butler-Laporte G; Povysil G; Kosmicki JA; Cirulli ET; Drivas T; Furini S; Saad C; Schmidt A; Olszewski P; Korotko U
• Papillary Tumor of the Pineal Region Rare Pediatric CNS Tumor Case Series Treated in King Fahad Medical City (KFMC).
  Curr Oncol Volume: 29 Page(s): 7558 - 7568
  10/10/2022 Authors: Mobark NA; Alharbi M; Alotabi F; Alshoumer A; Al Shakweer W; AlNaqib ZG; AlSaad AN; Balbaid AO; Alsolme E; Abedalthagafi MS
• Commentary: Von Hippel-Lindau disease: A clinical and scientific review.
  Eur J Hum Genet Volume: 30 Page(s): 1103 - 1104
  10/01/2022 Authors: Abedalthagafi M
• Expression of Programmed Cell Death-L1 (PD-L1) Protein and Mismatch Repair Mutations in Orbital Tumours-a Pilot Study.
  Eur J Ophthalmol Volume: 32 Page(s): 3097 - 3102
  09/01/2022 Authors: AlSemari MA; Strianese D; Abu Safieh L; Al Hussain H; Abedalthagafi M; Edward DP
• Periocular Pigmented Basal Cell Carcinomas: Clinicopathologic Features and Mutational Profile.
  Ophthalmic Plast Reconstr Surg Volume: 38 Page(s): 475 - 482
  09/01/2022 Authors: Hassanin F; Al Hussain H; Maktabi A; Adly N; Alsuabeyl M; Abedalthagafi M; Edward DP; Strianese D
• A first update on mapping the human genetic architecture of COVID-19.
  Nature Volume: 608 Page(s): E1 - E10
  08/01/2022 Authors: COVID-19 Host Genetics Initiative
• Whole-genome sequencing reveals host factors underlying critical COVID-19.
  Nature Volume: 607 Page(s): 97 - 103
  07/01/2022 Authors: Kousathanas A; Pairo-Castineira E; Rawlik K; Stuckey A; Odhams CA; Walker S; Russell CD; Malinauskas T; Wu Y; Millar J
• MANAGEMENT OF CNS TUMOR WITH BCOR INTERNAL TANDEM DUPLICATION WITH MULTIMODALITIES THERAPY: SURGERY, INTENSIVE CHEMOTHERAPY, AND RADIATION
  Volume: 24 Page(s): 48 - 49
  06/01/2022 Authors: Mobark NA; Alharbi M; Ballourah W; Alsultan A; El El Manjomi F; AlNaqib Z; Al-Banyan A; Balbaid AAO; Abedalthagafi M
• PERSONALIZED TREATMENT FOR MOLECULARLY HETEROGENEOUS DIFFUSE MIDLINE GLIOMA, H3 K27-ALTERED PAEDIATRIC CASE
  Volume: 24 Page(s): 26 - 26
  06/01/2022 Authors: Mobark NA; Alharbi M; Bayoumi YS; Albanyan A; Balbaid AAO; Aljabarat WAR; Abedalthagafi M
• PAPILLARY TUMOR OF PINEAL REGION RARE PEDIATRIC CNS TUMOR: CASE SERIES TREATED IN KING FAHAD MEDICAL CITY KFMC
  Volume: 24 Page(s): 146 - 147
  06/01/2022 Authors: Mobark NA; AlHarbi M; Alotabi F; Alshoumer A; Alsadi A; AlNaqib ZG; Al Shakweer W; Balbaid AO; Abedalthagafi M
• A molecularly integrated grade for meningioma.
  Neuro Oncol Volume: 24 Page(s): 796 - 808
  05/04/2022 Authors: Driver J; Hoffman SE; Tavakol S; Woodward E; Maury EA; Bhave V; Greenwald NF; Nassiri F; Aldape K; Zadeh G
• Unlocking capacities of genomics for the COVID-19 response and future pandemics.
  Nat Methods Volume: 19 Page(s): 374 - 380
  04/01/2022 Authors: Knyazev S; Chhugani K; Sarwal V; Ayyala R; Singh H; Karthikeyan S; Deshpande D; Baykal PI; Comarova Z; Lu A
• New Insights into the Genomic Landscape of Skull Base Meningiomas
  Volume: 68 Page(s): 137 - 138
  04/01/2022 Authors: Alsahlawi A; Abedalthagafi M
• Index case identification and outcomes of cascade testing in high-risk breast and colorectal cancer predisposition genes.
  Eur J Hum Genet Volume: 30 Page(s): 392 - 393
  04/01/2022 Authors: Abedalthagafi M
• Correlation between ABO Blood Group Phenotype and the Risk of COVID-19 Infection and Severity of Disease in a Saudi Arabian Cohort.
  J Epidemiol Glob Health Volume: 12 Page(s): 85 - 91
  03/01/2022 Authors: Jawdat D; Hajeer A; Massadeh S; Aljawini N; Abedalthagafi MS; Alaamery M
• Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severity.
  Hum Genet Volume: 141 Page(s): 147 - 173
  01/01/2022 Authors: Fallerini C; Picchiotti N; Baldassarri M; Zguro K; Daga S; Fava F; Benetti E; Amitrano S; Bruttini M; Palmieri M
• The Saudi Critical Care Society practice guidelines on the management of COVID-19 in the ICU: Therapy section.
  J Infect Public Health Volume: 15 Page(s): 142 - 151
  01/01/2022 Authors: Alhazzani W; Alshahrani M; Alshamsi F; Aljuhani O; Eljaaly K; Hashim S; Alqahtani R; Alsaleh D; Al Duhailib Z; Algethamy H
• Association of KIR gene polymorphisms with COVID-19 disease.
  Clin Immunol Volume: 234 Page(s): 108911
  01/01/2022 Authors: Hajeer A; Jawdat D; Massadeh S; Aljawini N; Abedalthagafi MS; Arabi YM; Alaamery M
• Editorial: Women in science: Genetics.
  Front Genet Volume: 13 Page(s): 1038317
  01/01/2022 Authors: de Vasconcellos JF; Abedalthagafi M; Calo S; Dajani R; Dlamini Z; Hidalgo B; Le Goff C; Vasanthakumar A
• Clinicopathologic and genomic characterizations of brain metastases using a comprehensive genomic panel.
  Front Med (Lausanne) Volume: 9 Page(s): 947456
  01/01/2022 Authors: Barakeh DH; Alsolme E; Alqubaishi F; Almutairi A; Alhabeeb L; Al Abdulmohsen S; Almohsen SS; Alayed D; AlAnazi SR; AlZahrani M
• SARS-CoV-2 susceptibility and COVID-19 disease severity are associated with genetic variants affecting gene expression in a variety of tissues.
  Cell Rep Volume: 37 Page(s): 110020
  11/16/2021 Authors: D'Antonio M; Nguyen JP; Arthur TD; Matsui H; COVID-19 Host Genetics Initiative; D'Antonio-Chronowska A; Frazer KA
• Papillary Tumor of Pineal Region Rare Pediatric CNS Tumor Case Series Treated in King Fahad Medical City KFMC
  Volume: 68 Page(s): S507 - S508
  11/01/2021 Authors: Mobark N; Alharbi M; Alotaibi FE; Alsaad A; Alnaqib ZG; Al Shakweer W; Alshoumer A; Abedalthagafi M
• Rare loss-of-function variants in type I IFN immunity genes are not associated with severe COVID-19.
  J Clin Invest Volume: 131
  07/15/2021 Authors: Povysil G; Butler-Laporte G; Shang N; Wang C; Khan A; Alaamery M; Nakanishi T; Zhou S; Forgetta V; Eveleigh RJ
• Immune profiling of pituitary tumors reveals variations in immune infiltration and checkpoint molecule expression.
  Pituitary Volume: 24 Page(s): 359 - 373
  06/01/2021 Authors: Mei Y; Bi WL; Agolia J; Hu C; Giantini Larsen AM; Meredith DM; Al Abdulmohsen S; Bale T; Dunn GP; Abedalthagafi M
• The Immune-genetics Profiling of the CNS Metastatic Cancers Compared to their Primary Tumors
  Volume: 80 Page(s): 572 - 572
  06/01/2021 Authors: Abedalthagafi M; Al Abdulmohsen S; Alhabeeb L; Barakeh D; Almohsen S; Alayed D; AlAnazi S; AlZahrani M; Alsolme E; Alqubaishi F
• Diversity in immunogenomics: the value and the challenge.
  Nat Methods Volume: 18 Page(s): 588 - 591
  06/01/2021 Authors: Peng K; Safonova Y; Shugay M; Popejoy AB; Rodriguez OL; Breden F; Brodin P; Burkhardt AM; Bustamante C; Cao-Lormeau V-M
• Epigenomics and immunotherapeutic advances in pediatric brain tumors.
  NPJ Precis Oncol Volume: 5 Page(s): 34
  04/30/2021 Authors: Abedalthagafi M; Mobark N; Al-Rashed M; AlHarbi M
• Unlocking capacities of viral genomics for the COVID-19 pandemic response.
  ArXiv
  04/28/2021 Authors: Knyazev S; Chhugani K; Sarwal V; Ayyala R; Singh H; Karthikeyan S; Deshpande D; Comarova Z; Lu A; Porozov Y
• Improving the completeness of public metadata accompanying omics studies.
  Genome Biol Volume: 22 Page(s): 106
  04/15/2021 Authors: Rajesh A; Chang Y; Abedalthagafi MS; Wong-Beringer A; Love MI; Mangul S
• Landscape of somatic mutations in breast cancer: new opportunities for targeted therapies in Saudi Arabian patients.
  Oncotarget Volume: 12 Page(s): 686 - 697
  03/30/2021 Authors: Barakeh DH; Aljelaify R; Bashawri Y; Almutairi A; Alqubaishi F; Alnamnakani M; Almubarak L; Al Naeem A; Almushawah F; Alrashed M
• Primary mismatch repair deficient IDH-mutant astrocytoma (PMMRDIA) is a distinct type with a poor prognosis.
  Acta Neuropathol Volume: 141 Page(s): 85 - 100
  01/01/2021 Authors: Suwala AK; Stichel D; Schrimpf D; Kloor M; Wefers AK; Reinhardt A; Maas SLN; Kratz CP; Schweizer L; Hasselblatt M
• Editorial: Genomics and Epigenomics of Cancer Immunotherapy: Challenges and Clinical Implications.
  Front Oncol Volume: 11 Page(s): 704397
  01/01/2021 Authors: Abedalthagafi M
• Fabrication of a Lateral Flow Assay for Rapid In-Field Detection of COVID-19 Antibodies Using Additive Manufacturing Printing Technologies.
  Int J Bioprint Volume: 7 Page(s): 399
  01/01/2021 Authors: Alrashoudi AA; Albalawi HI; Aldoukhi AH; Moretti M; Bilalis P; Abedalthagafi M; Hauser CAE
• The clinico-pathologic profile of primary and recurrent orbital/periorbital plexiform neurofibromas (OPPN).
  PLoS One Volume: 16 Page(s): e0258802
  01/01/2021 Authors: Alabduljabbar M; Strianese D; Al-Sheikh O; Alkatan HM; Al-Hussain H; Maktabi AMY; Khandekar R; Abedalthagafi M; Edward DP
• The History and Challenges of Women in Genetics: A Focus on Non-Western Women.
  Front Genet Volume: 12 Page(s): 759662
  01/01/2021 Authors: Elbardisy H; Abedalthagafi M
• Failure to replicate the association of rare loss-of-function variants in type I IFN immunity genes with severe COVID-19.
  medRxiv
  12/21/2020 Authors: Povysil G; Butler-Laporte G; Shang N; Weng C; Khan A; Alaamery M; Nakanishi T; Zhou S; Forgetta V; Eveleigh R
• Immunophenotype of Vestibular Schwannomas.
  Otol Neurotol Volume: 41 Page(s): e1290 - e1296
  12/01/2020 Authors: Bi WL; Gupta S; Mei Y; Abdulmohsen SA; Giantini Larsen A; Unadkat P; Ramkissoon S; Abedalthagafi M; Dunn IF
• FIRST LINE THERAPY OF PEDIATRIC GLIOBLASTOMA WITH LAROTRECTINIB
  Volume: 22 Page(s): 345 - 345
  12/01/2020 Authors: Alharbi M; Mobark NA; Balbaid AAO; Alanazi FA; Aljabarat WAR; Bakhsh EAK; Turkistani M; Abedalthagafi M
• CLINICAL MANAGEMENT AND GENOMIC PROFILING OF PEDIATRIC LOW-GRADE GLIOMAS IN SAUDI ARABIA
  Volume: 22 Page(s): 366 - 366
  12/01/2020 Authors: Mobark NA; Alharbi M; Balbaid AAO; Al-Habeeb L; AlMubarak L; Alaljelaify R; AlSaeed M; Almutairi A; Alanazi FA; Bashawri Y
• METHYLATION PROFILING OF PEDIATRIC MEDULLOBLASTOMA IN SAUDI ARABIA IN A CLINICAL SETTING PERMITS SUB-CLASSIFICATION AND REVEALS NEW OUTCOME PREDICTIONS
  Volume: 22 Page(s): 386 - 387
  12/01/2020 Authors: Alharbi M; Mobark N; Balbaid AAO; Bashawri Y; Abu Safieh L; Alowayn A; Alaljelaify R; AlSaeed M; Almutairi A; Alqubaishi F
• PEDIATRIC LOW-GRADE GLIOMAS IN SAUDI ARABIA: RETROSPECTIVE ANALYSIS OF CHILDREN WITH LOW-GRADE GLIOMAS TREATED IN KING FAHAD MEDICAL CITY KFMC-SINGLE INSTITUTIONAL EXPERIENCE
  Volume: 22 Page(s): 368 - 369
  12/01/2020 Authors: Alammar F; Alharpi M; Ahmad M; Al-Banyan A; Alotaibi FE; Al Shakweer W; Abedalthagafi M; Mobark NA
• New Insights into the Genomic Landscape of Skull Base Meningiomas Identified FGFR3 in a Subset of Patients with Favorable Prognoses
  Volume: 67 Page(s): 291 - 292
  12/01/2020 Authors: Alsahlawi A; Abedalthagafi M; Aljelaify R
• CHALLENGES AND SPECIFIC STRATEGIES FOR CONSTITUTIONAL MISMATCH REPAIR DEFICIENCY SYNDROME IN LOW RESOURCE SETTINGS. ON BEHALF OF THE INTERNATIONAL RRD CONSORTIUM IN LOW RESOURCE SETTINGS PANEL
  Volume: 22 Page(s): 454 - 454
  12/01/2020 Authors: Kebudi R; Amayiri NN; Abedalthagafi M; Rana AN; Kirmani S; Musthaq N; Al Lamki Z; El Houdzi J; Yazici H; El-Naggar S
• Challenges, Specific Strategies for CMMRD in Low Resource Settings. On behalf of the International RRD Consortium in Low Resource Settings Panel
  Volume: 67 Page(s): S143 - S143
  12/01/2020 Authors: Kebudi R; Amayiri N; Abedalthagafi M; Rana A; Kirmani S; Musthaq N; Al Lamki Z; El Houdzi J; Yazici H; El-Naggar S
• A SCALABLE MOLECULARLY INTEGRATED CLASSIFIER FOR MENINGIOMA OUTPERFORMS WHO CLASSIFICATION
  Volume: 22 Page(s): 172 - 172
  11/01/2020 Authors: Bi WL; Driver J; Tavakol S; Hoffman S; Woodward E; Abedalthagafi M; Al-Mefty O; Ligon K; Beroukhim R; Ligon A
• iSCAN: An RT-LAMP-coupled CRISPR-Cas12 module for rapid, sensitive detection of SARS-CoV-2.
  Virus Res Volume: 288 Page(s): 198129
  10/15/2020 Authors: Ali Z; Aman R; Mahas A; Rao GS; Tehseen M; Marsic T; Salunke R; Subudhi AK; Hala SM; Hamdan SM
• Cell-based analysis of CAD variants identifies individuals likely to benefit from uridine therapy.
  Genet Med Volume: 22 Page(s): 1598 - 1605
  10/01/2020 Authors: Del Cao-Ochoa F; Ng BG; Abedalthagafi M; Almannai M; Cohn RD; Costain G; Elpeleg O; Houlden H; Karimiani EG; Liu P
• Position paper: Challenges and specific strategies for constitutional mismatch repair deficiency syndrome in low-resource settings.
  Pediatr Blood Cancer Volume: 67 Page(s): e28309
  08/01/2020 Authors: Kebudi R; Amayiri N; Abedalthagafi M; Rana AN; Kirmani S; Musthaq N; Lamki ZA; Houdzi JE; Yazici H; El-Naggar S
• New insights into the genomic landscape of meningiomas identified FGFR3 in a subset of patients with favorable prognoses
  Volume: 79 Page(s): 690 - 690
  06/01/2020 Authors: Abedalthagafi M
• Vestibular Schwannoma Immune Landscape
  Volume: 79 Page(s): 692 - 692
  06/01/2020 Authors: Abedalthagafi M; Bi L; Gupta S; Dunn I
• Methylation Profiling of Medulloblastoma in a Clinical Setting Permits Sub-classification and Reveals New Outcome Predictions
  Volume: 22 Page(s): S71 - S72
  05/01/2020 Authors: Abedalthagafi M
• Clinical Management and Genomic Profiling of Pediatric Low-Grade Gliomas in Saudi Arabia
  Volume: 22 Page(s): S71 - S71
  05/01/2020 Authors: Abedalthagafi M
• Telomerase reverse transcriptase promoter mutations in cancers derived from multiple organ sites among middle eastern population.
  Genomics Volume: 112 Page(s): 1746 - 1753
  03/01/2020 Authors: Siraj AK; Bu R; Iqbal K; Parvathareddy SK; Siraj N; Siraj S; Diaz MRF; Rala DR; Benito AD; Sabido MA
• Clinical management and genomic profiling of pediatric low-grade gliomas in Saudi Arabia.
  PLoS One Volume: 15 Page(s): e0228356
  01/01/2020 Authors: Mobark NA; Alharbi M; Alhabeeb L; AlMubarak L; Alaljelaify R; AlSaeed M; Almutairi A; Alqubaishi F; Ahmad M; Al-Banyan A
• Regression of ETV6-NTRK3 Infantile Glioblastoma After First-Line Treatment With Larotrectinib.
  JCO Precis Oncol Volume: 4
  01/01/2020 Authors: Alharbi M; Mobark NA; Balbaid AAO; Alanazi FA; Aljabarat WAR; Bakhsh EA; Ramkissoon SH; Abedalthagafi M
• Sickle cell disease: A distinction of two most frequent genotypes (HbSS and HbSC).
  PLoS One Volume: 15 Page(s): e0228399
  01/01/2020 Authors: da Guarda CC; Yahoudhou SCMA; Santiago RP; Neres JSDS; Fernandes CFDL; Aleluia MM; Figueiredo CVB; Fiuza LM; Carvalho SP; Oliveira RMD
• Familial/inherited cancer syndrome: a focus on the highly consanguineous Arab population.
  NPJ Genom Med Volume: 5 Page(s): 3
  01/01/2020 Authors: AlHarthi FS; Qari A; Edress A; Abedalthagafi M
• Methylation Profiling of Medulloblastoma in a Clinical Setting Permits Sub-classification and Reveals New Outcome Predictions.
  Front Neurol Volume: 11 Page(s): 167
  01/01/2020 Authors: Alharbi M; Mobark N; Bashawri Y; Abu Safieh L; Alowayn A; Aljelaify R; AlSaeed M; Almutairi A; Alqubaishi F; AlSolme E
• Genomic Profiling of Circulating Tumor DNA From Cerebrospinal Fluid to Guide Clinical Decision Making for Patients With Primary and Metastatic Brain Tumors.
  Front Neurol Volume: 11 Page(s): 544680
  01/01/2020 Authors: Ramkissoon LA; Pegram W; Haberberger J; Danziger N; Lesser G; Strowd R; Dahiya S; Cummings TJ; Bi WL; Abedalthagafi M
• Case Report: Medulloblastoma in a Child with Wiedemann-Steiner Syndrome
  Volume: 66 Page(s): S553 - S554
  12/01/2019 Authors: Mobarak NA; AlHarbi M; Balbaid AAO; Aljabarat WAR; Abedalthagafi M
• New Insights into Pediatric Low-Grade Gliomas in Saudi Arabia Revealed Through Genetic Profiling Single Centre Experience
  Volume: 66 Page(s): S188 - S188
  12/01/2019 Authors: Mobarak NA; Alharpi M; Ahmad M; Al-Banyan A; Alotabi FE; Abedalthagafi M
• Survival of Children with Medulloblastoma in Saudi Arabia Results of Prospective Saudi Arabian Pediatric Hematology Oncology Society SAPHOS National Multi-Centers Study Protocol
  Volume: 66 Page(s): S168 - S168
  12/01/2019 Authors: Alharbi M; Abdullah S; Alharbi QK; Al-shahrani M; Abdalla K; Ahmed O; Aljabarat WAR; Balbaid AAO; Mobark NA; Abedalthagafi M
• Childhood Medulloblastoma and Pineablastoma Treated with Saphos Study Protocol at King Fahad Medical City (KFMC): 10 Years Experience at Single Tertiary Center in Saudi Arabia
  Volume: 66 Page(s): S167 - S168
  12/01/2019 Authors: Alharbi M; Mobark NA; Balbaid AAO; Marie AS; Al-Manjomi F; Ballourah W; Fayea NYH; Rayis M; Ullah Z; Maqsood A
• Management of Refractory Extensive Intracranial Juvenile Xanthogranuloma (JXG) in a Child
  Volume: 66 Page(s): S554 - S554
  12/01/2019 Authors: Mobarak NA; Alharpi M; Al Shakweer W; Alotabi FE; Abedalthagafi M
• New insights into the genomic landscape of meningiomas identified FGFR3 in a subset of patients with favorable prognoses.
  Oncotarget Volume: 10 Page(s): 5549 - 5559
  09/17/2019 Authors: AlSahlawi A; Aljelaify R; Magrashi A; AlSaeed M; Almutairi A; Alqubaishi F; Alturkistani A; AlObaid A; Abouelhoda M; AlMubarak L
• Brain tumor genomic profiling in Saudi Arabia: New insights into pediatric low-grade gliomas
  Volume: 78 Page(s): 531 - 531
  06/01/2019 Authors: Abedalthagafi M; Mobark N; AlHarbi M; Al-Habeeb L; Ramkissoon L; Ramkissoon S
• NEW INSIGHTS INTO PEDIATRIC LOW-GRADE GLIOMAS IN SAUDI ARABIA REVEALED THROUGH GENETIC PROFILING SINGLE CENTER EXPERIENCE
  Volume: 21 Page(s): 99 - 99
  04/01/2019 Authors: Mobark NA; Alharpi M; Ahmad M; Al-Banyan A; Alotabi FE; Abedalthagafi M
• Precision medicine of monogenic disorders: Lessons learned from the Saudi human genome.
  Front Biosci (Landmark Ed) Volume: 24 Page(s): 870 - 889
  03/01/2019 Authors: Abedalthagafi MS
• Recent Advances in Meningioma Immunogenetics.
  Front Oncol Volume: 9 Page(s): 1472
  01/01/2019 Authors: Al-Rashed M; Foshay K; Abedalthagafi M
• Durable Response to Nivolumab in a Pediatric Patient with Refractory Glioblastoma and Constitutional Biallelic Mismatch Repair Deficiency.
  Oncologist Volume: 23 Page(s): 1401 - 1406
  12/01/2018 Authors: AlHarbi M; Ali Mobark N; AlMubarak L; Aljelaify R; AlSaeed M; Almutairi A; Alqubaishi F; Hussain ME; Balbaid AAO; Said Marie A
• Childhood Medulloblastoma and Pineablastoma Treated with SAPHOS Study Protocol at King Fahad Medical City (KFMC): 10 Years Experience at Single Tertiary Center in Saudi Arabia
  Volume: 65 Page(s): S424 - S424
  11/01/2018 Authors: Alharbi M; Mobarki NA; Balbaid A; Marie AAS; Fayea N; Al-Manjomi F; Ballourah W; Rayis M; Ullah Z; Hamdan AB
• Constitutional mismatch repair-deficiency: current problems and emerging therapeutic strategies.
  Oncotarget Volume: 9 Page(s): 35458 - 35469
  10/23/2018 Authors: Abedalthagafi M
• Expression of renal cell markers and detection of 3p loss links endolymphatic sac tumor to renal cell carcinoma and warrants careful evaluation to avoid diagnostic pitfalls.
  Acta Neuropathol Commun Volume: 6 Page(s): 107
  10/19/2018 Authors: Jester R; Znoyko I; Garnovskaya M; Rozier JN; Kegl R; Patel S; Tran T; Abedalthagafi M; Horbinski CM; Richardson M
• Meningioma transcription factors link cell lineage with systemic metabolic cues.
  Neuro Oncol Volume: 20 Page(s): 1331 - 1343
  09/03/2018 Authors: Du Z; Brewster R; Merrill PH; Chmielecki J; Francis J; Aizer A; Abedalthagafi M; Sholl LM; Geffers L; Alexander B
• A Jordanian biologist redefines success for women in science.
  Nature Volume: 560 Page(s): 164
  08/01/2018 Authors: Abedalthagafi M
• DURABLE RESPONSE TO NIVOLUMAB IN A PEDIATRIC PATIENT WITH REFRACTORY GLIOBLASTOMA AND CONSTITUTIONAL BIALLELIC MISMATCH REPAIR DEFICIENCY
  Volume: 20 Page(s): 98 - 98
  06/01/2018 Authors: AlHarbi M; Mobark NA; Al-Mubarak L; Alaljelaify R; AlSaeed M; Almutairi A; Alqubaishi F; Hussain E; AlSubaie L; AlShieban S
• PREVALENCE OF BIALLELIC MISMATCH REPAIR DEFICIENCY IN CHILDREN WITH MALIGNANT GLIOMA TREATED AT KING FAHAD MEDICAL CITY (KFMC)
  Volume: 20 Page(s): 89 - 89
  06/01/2018 Authors: Mobark NA; Mosleh O; Marie AAAS; AlMubara L; AlTassan N; Howakins C; Alshammari FSFS; Al-Huzaimi FI; Aboabat RI; AlDossari FS
• A CASE OF MOLECULARLY PROFILED EXTRANEURAL MEDULLOBLASTOMA METASTASES IN A CHILD
  Volume: 20 Page(s): 128 - 128
  06/01/2018 Authors: Mobark NA; Al-Harbi M; Santagata S; Abedalthagafi M
• Prevalence of Constitutional Mismatch Repair Deficiency in Saudi Arabian HGG cohort and successful use of Nivolumab in an affected child
  Volume: 77 Page(s): 488 - 488
  06/01/2018 Authors: Abedalthagafi M; AlHarbi M; Mobark N
• Craniopharyngioma: a roadmap for scientific translation.
  Neurosurg Focus Volume: 44 Page(s): E12
  06/01/2018 Authors: Gupta S; Bi WL; Giantini Larsen A; Al-Abdulmohsen S; Abedalthagafi M; Dunn IF
• Clinicopathologic implications of genomic disruption in pituitary adenomas
  Volume: 128 Page(s): 5 - 5
  04/01/2018 Authors: Larsen A; Bi W; Mei Y; Abedalthagafi M; Greenwald N; Beroukhim R; Laws E; Dunn I
• As a Saudi woman scientist, I'm tired of negative stereotypes.
  Nature Volume: 554 Page(s): 405
  02/22/2018 Authors: Abedalthagafi M
• As a Saudi woman scientist, I'm tired of negative stereotypes.
  Nature Volume: 554 Page(s): 405
  02/01/2018 Authors: Abedalthagafi M
• A case of molecularly profiled extraneural medulloblastoma metastases in a child.
  BMC Med Genet Volume: 19 Page(s): 10
  01/17/2018 Authors: Mobark NA; Al-Harbi M; Mosleh O; Santagata S; Snuderl M; Abedalthagafi M
• Rare TP53 variant associated with Li-Fraumeni syndrome exhibits variable penetrance in a Saudi family.
  NPJ Genom Med Volume: 3 Page(s): 35
  01/01/2018 Authors: AlHarbi M; Mubarak N; AlMubarak L; Aljelaify R; AlSaeed M; Almutairi A; AlJabarat W; Alqubaishi F; Al-Subaie L; AlTassan N
• Immunogenetics of glioblastoma: the future of personalized patient management.
  NPJ Precis Oncol Volume: 2 Page(s): 27
  01/01/2018 Authors: Abedalthagafi M; Barakeh D; Foshay KM
• "DEDIFFERENTIATED" GLIOBLASTOMA: A CLINICOPATHOLOGICAL AND MOLECULAR STUDY
  Volume: 19 Page(s): 171 - 171
  11/01/2017 Authors: Abedalthagafi M; Sengupta S; Huang R; Ligon K
• Osteoglycin promotes meningioma development through downregulation of NF2 and activation of mTOR signaling.
  Cell Commun Signal Volume: 15 Page(s): 34
  09/18/2017 Authors: Mei Y; Du Z; Hu C; Greenwald NF; Abedalthagafi M; Agar NYR; Dunn GP; Bi WL; Santagata S; Dunn IF
• Clinical Identification of Oncogenic Drivers and Copy-Number Alterations in Pituitary Tumors.
  Endocrinology Volume: 158 Page(s): 2284 - 2291
  07/01/2017 Authors: Bi WL; Greenwald NF; Ramkissoon SH; Abedalthagafi M; Coy SM; Ligon KL; Mei Y; MacConaill L; Ducar M; Min L
• Radiogenomics in Meningioma: Associations Between Chromosome Copy Number Variation and Radiographic Features
  Volume: 44 Page(s): 3286 - 3286
  06/01/2017 Authors: Coroller T; Bi W; Greenwald N; Huynh E; Zeleznik R; Parmar C; Abedalthagafi M; Aizer A; Wu W; Gupta S
• Medulloblastoma genomic subgroup-specific outcomes in irradiated children above 3 years treated at King Fahad medical city (KFMC)
  Volume: 76 Page(s): 499 - 499
  06/01/2017 Authors: Abedalthagafi M; Mobark N; AlHarbi M; Mosleh O; Santagata S
• Genomic analysis of high-grade meningiomas
  Volume: 76 Page(s): 494 - 494
  06/01/2017 Authors: Abedalthagafi M; Bi L; Greenwald N; Wala J; Agarwalla P; Horowitz P; Al-Mefty O; Dunn G; Santagata S; Dunn I
• Lymph node metastasis of presacral ependymoblastoma in a young child.
  J Clin Neurosci Volume: 40 Page(s): 64 - 66
  06/01/2017 Authors: Abedalthagafi M; Aldandan SW; Alrayis M; Ahmed AA
• GENOMIC LANDSCAPE OF MENINGIOMAS
  Volume: 19 Page(s): 16 - 16
  05/01/2017 Authors: Bi WL; Greenwald NF; Abedalthagafi M; Agarwalla P; Horowitz P; Santagata S; Al-Mefty O; Beroukhim R; Dunn IF
• GENOMIC LANDSCAPE OF PITUITARY ADENOMAS
  Volume: 19 Page(s): 20 - 20
  05/01/2017 Authors: Bi WL; Greenwald NF; Abedalthagafi M; Horowitz P; Laws ER; Beroukhim R; Dunn IF
• Germline and somatic BAP1 mutations in high-grade rhabdoid meningiomas.
  Neuro Oncol Volume: 19 Page(s): 535 - 545
  04/01/2017 Authors: Shankar GM; Abedalthagafi M; Vaubel RA; Merrill PH; Nayyar N; Gill CM; Brewster R; Bi WL; Agarwalla PK; Thorner AR
• Landscape of Genomic Alterations in Pituitary Adenomas.
  Clin Cancer Res Volume: 23 Page(s): 1841 - 1851
  04/01/2017 Authors: Bi WL; Horowitz P; Greenwald NF; Abedalthagafi M; Agarwalla PK; Gibson WJ; Mei Y; Schumacher SE; Ben-David U; Chevalier A
• BAP1 Mutations in Rhabdoid Meningiomas
  Volume: 30 Page(s): 428A - 428A
  02/01/2017 Authors: Abedalthagafi M
• BAP1 Mutations in Rhabdoid Meningiomas
  Volume: 97 Page(s): 428A - 428A
  02/01/2017 Authors: Abedalthagafi M
• Erratum: Genomic landscape of high-grade meningiomas.
  NPJ Genom Med Volume: 2 Page(s): 26
  01/01/2017 Authors: Bi WL; Greenwald NF; Abedalthagafi M; Wala J; Gibson WJ; Agarwalla PK; Horowitz P; Schumacher SE; Esaulova E; Mei Y
• Radiographic prediction of meningioma grade by semantic and radiomic features.
  PLoS One Volume: 12 Page(s): e0187908
  01/01/2017 Authors: Coroller TP; Bi WL; Huynh E; Abedalthagafi M; Aizer AA; Greenwald NF; Parmar C; Narayan V; Wu WW; Miranda de Moura S
• Genomic landscape of high-grade meningiomas.
  NPJ Genom Med Volume: 2
  01/01/2017 Authors: Bi WL; Greenwald NF; Abedalthagafi M; Wala J; Gibson WJ; Agarwalla PK; Horowitz P; Schumacher SE; Esaulova E; Mei Y
• Cancer diagnostics: The journey from histomorphology to molecular profiling.
  Oncotarget Volume: 7 Page(s): 58696 - 58708
  09/06/2016 Authors: Ahmed AA; Abedalthagafi M
• Genomic landscape of intracranial meningiomas.
  J Neurosurg Volume: 125 Page(s): 525 - 535
  09/01/2016 Authors: Bi WL; Abedalthagafi M; Horowitz P; Agarwalla PK; Mei Y; Aizer AA; Brewster R; Dunn GP; Al-Mefty O; Alexander BM
• MAPK activation and HRAS mutation identified in pituitary spindle cell oncocytoma.
  Oncotarget Volume: 7 Page(s): 37054 - 37063
  06/14/2016 Authors: Miller MB; Bi WL; Ramkissoon LA; Kang YJ; Abedalthagafi M; Knoff DS; Agarwalla PK; Wen PY; Reardon DA; Alexander BM
• Early Grade Classification in Meningioma Patients Combining Radiomics and Semantics Data
  Volume: 43 Page(s): 3348 - 3349
  06/01/2016 Authors: Coroller T; Bi W; Abedalthagafi M; Aizer A; Wu W; Greenwald N; Beroukhim R; Al-Mefty O; Santagata S; Dunn I
• Molecular Genetics Pathology of Pituitary Adenomas
  Volume: 75 Page(s): 574 - 574
  06/01/2016 Authors: Abedalthagafi M; Abedalthagafi M; Bi WL; Horowitz PH; Agarwalla P; Gibson W; Laws E; Beroukhim R; Santagata S
• Oncogenic PI3K mutations are as common as AKT1 and SMO mutations in meningioma.
  Neuro Oncol Volume: 18 Page(s): 649 - 655
  05/01/2016 Authors: Abedalthagafi M; Bi WL; Aizer AA; Merrill PH; Brewster R; Agarwalla PK; Listewnik ML; Dias-Santagata D; Thorner AR; Van Hummelen P
• Decreased FOXJ1 expression and its ciliogenesis programme in aggressive ependymoma and choroid plexus tumours.
  J Pathol Volume: 238 Page(s): 584 - 597
  03/01/2016 Authors: Abedalthagafi MS; Wu MP; Merrill PH; Du Z; Woo T; Sheu S-H; Hurwitz S; Ligon KL; Santagata S
• Dramatic Response of BRAF V600E Mutant Papillary Craniopharyngioma to Targeted Therapy.
  J Natl Cancer Inst Volume: 108
  02/01/2016 Authors: Brastianos PK; Shankar GM; Gill CM; Taylor-Weiner A; Nayyar N; Panka DJ; Sullivan RJ; Frederick DT; Abedalthagafi M; Jones PS
• Oncogenic Mutations in PI3Kinase in Skull-Based Meningioma
  Volume: 29 Page(s): 429A - 429A
  02/01/2016 Authors: Abedalthagafi M; Bi WL; Aizer AA; Merrill P; Brewster R; Listewnik M; Van Hummelen P; Ramkissoon SH; Folkerth RD; Ligon KL
• Oncogenic Mutations in PI3Kinase in Skull-Based Meningioma
  Volume: 96 Page(s): 429A - 429A
  02/01/2016 Authors: Abedalthagafi M; Bi WL; Aizer AA; Merrill P; Brewster R; Listewnik M; Van Hummelen P; Ramkissoon SH; Folkerth RD; Ligon KL
• A prognostic cytogenetic scoring system to guide the adjuvant management of patients with atypical meningioma.
  Neuro Oncol Volume: 18 Page(s): 269 - 274
  02/01/2016 Authors: Aizer AA; Abedalthagafi M; Bi WL; Horvath MC; Arvold ND; Al-Mefty O; Lee EQ; Nayak L; Rinne ML; Norden AD
• Genomic characterization of recurrent high-grade astroblastoma.
  Cancer Genet Volume: 209 Page(s): 321 - 330
  01/01/2016 Authors: Bale TA; Abedalthagafi M; Bi WL; Kang YJ; Merrill P; Dunn IF; Dubuc A; Charbonneau SK; Brown L; Ligon AH
• A Prognostic Molecular Scoring System to Guide the Adjuvant Management of Patients With Gross Totally Resected Atypical Meningioma
  Volume: 93 Page(s): S167 - S167
  11/01/2015 Authors: Aizer AA; Abedalthagafi M; Bi L; Horvath MC; Ligon AH; Arvold ND; Dunn IF; Santagata S; Alexander B
• A Prognostic Cytogenetic Scoring System to Guide the Adjuvant Management of Patients with Atypical Meningioma
  Volume: 17 Page(s): 820 - 821
  11/01/2015 Authors: Abedalthagafi M
• The Potential Role of Social Media Platforms in Community Awareness of Antibiotic Use in the Gulf Cooperation Council States: Luxury or Necessity?
  J Med Internet Res Volume: 17 Page(s): e233
  10/15/2015 Authors: Zowawi HM; Abedalthagafi M; Mar FA; Almalki T; Kutbi AH; Harris-Brown T; Harbarth S; Balkhy HH; Paterson DL; Hasanain RA
• Clinical implementation of integrated whole-genome copy number and mutation profiling for glioblastoma.
  Neuro Oncol Volume: 17 Page(s): 1344 - 1355
  10/01/2015 Authors: Ramkissoon SH; Bi WL; Schumacher SE; Ramkissoon LA; Haidar S; Knoff D; Dubuc A; Brown L; Burns M; Cryan JB
• Extracranial growth of glioblastoma multiforme.
  J Clin Neurosci Volume: 22 Page(s): 1521 - 1523
  09/01/2015 Authors: Forsyth TM; Bi WL; Abedalthagafi M; Dunn IF; Chiocca EA
• ARID1A and TERT promoter mutations in dedifferentiated meningioma.
  Cancer Genet Volume: 208 Page(s): 345 - 350
  06/01/2015 Authors: Abedalthagafi MS; Bi WL; Merrill PH; Gibson WJ; Rose MF; Du Z; Francis JM; Du R; Dunn IF; Ligon AH
• Myelodysplastic syndrome with progressive multifocal predominantly pontine demyelination.
  Neurol Neuroimmunol Neuroinflamm Volume: 2 Page(s): e90
  06/01/2015 Authors: Bhattacharyya S; Wong JC; Abedalthagafi M; Wahlster S; Vaitkevicius H
• MAPK Activation and HRAS Mutations Identified in Pituitary Spindle Cell Oncocytoma
  Volume: 74 Page(s): 610 - 610
  06/01/2015 Authors: Miller M; Bi WL; Ramkissoon L; Abedalthagafi M; Kang YJ; Knoff D; Dunn I; Wen P; Reardon D; Alexander B
• Dedifferentiation in choroid plexus tumors and ependymoma
  Volume: 74 Page(s): 609 - 609
  06/01/2015 Authors: Abedalthagafi M; Wu M; Merrill P; Woo T; Sheu S-H; Ligon K; Santagata S
• A prognostic molecular scoring system to guide the adjuvant management of patients with gross totally resected atypical meningioma
  Volume: 74 Page(s): 592 - 592
  06/01/2015 Authors: Abedalthagafi M; Aizer A; Bi WL; Horvath M; Arvold N; Al-Mefty O; Lee E; Nayak L; Rinne M; Norden A
• Cross-reactivity of the BRAF VE1 antibody with epitopes in axonemal dyneins leads to staining of cilia.
  Mod Pathol Volume: 28 Page(s): 596 - 606
  04/01/2015 Authors: Jones RT; Abedalthagafi MS; Brahmandam M; Greenfield EA; Hoang MP; Louis DN; Hornick JL; Santagata S
• Increased expression of the immune modulatory molecule PD-L1 (CD274) in anaplastic meningioma.
  Oncotarget Volume: 6 Page(s): 4704 - 4716
  03/10/2015 Authors: Du Z; Abedalthagafi M; Aizer AA; McHenry AR; Sun HH; Bray M-A; Viramontes O; Machaidze R; Brastianos PK; Reardon DA
• Genomic Alterations in Skull Base Meningiomas
  Volume: 95 Page(s): 427A - 427A
  02/01/2015 Authors: Abedalthagafi M; Bi WL; Mei Y; Alexander B; Beroukhim R; Al-Mefty O; Dunn I; Ligon A; Santagata S
• Genomic Profile of Chordoid Meningiomas
  Volume: 95 Page(s): 433A - 433A
  02/01/2015 Authors: Meredith D; Abedalthagafi M; Bi WL; Dunn I; Ligon A; Alexander B; Santagata S
• MAPK Activation and HRAS Mutations Identified in Pituitary Spindle Cell Oncocytoma
  Volume: 95 Page(s): 434A - 434A
  02/01/2015 Authors: Miller M; Bi WL; Ramkissoon L; Abedalthagafi M; Kang YJ; Knoff D; Dunn I; Wen P; Reardon D; Alexander B
• Clinical Implementation of Integrated Whole Genome Copy-Number and Mutation Profiling for Glioblastoma
  Volume: 95 Page(s): 435A - 435A
  02/01/2015 Authors: Ramkissoon S; Bi W; Schumacher S; Ramkissoon L; Haidar S; Knoff D; Dubuc A; Brown L; Abedalthagafi M; Reardon D
• Genomic Alterations in Skull Base Meningiomas
  Volume: 28 Page(s): 427A - 427A
  02/01/2015 Authors: Abedalthagafi M; Bi WL; Mei Y; Alexander B; Beroukhim R; Al-Mefty O; Dunn I; Ligon A; Santagata S
• Genomic Profile of Chordoid Meningiomas
  Volume: 28 Page(s): 433A - 433A
  02/01/2015 Authors: Meredith D; Abedalthagafi M; Bi WL; Dunn I; Ligon A; Alexander B; Santagata S
• Clinical Implementation of Integrated Whole Genome Copy-Number and Mutation Profiling for Glioblastoma
  Volume: 28 Page(s): 435A - 435A
  02/01/2015 Authors: Ramkissoon S; Bi W; Schumacher S; Ramkissoon L; Haidar S; Knoff D; Dubuc A; Brown L; Abedalthagafi M; Reardon D
• MAPK Activation and HRAS Mutations Identified in Pituitary Spindle Cell Oncocytoma
  Volume: 28 Page(s): 434A - 434A
  02/01/2015 Authors: Miller M; Linda W; Ramkissoon L; Abedalthagafi M; Kang YJ; Knoff D; Dunn I; Wen P; Reardon D; Alexander B
• Akt and Hippo Pathways in Ewing's Sarcoma Tumors and Their Prognostic Significance.
  J Cancer Volume: 6 Page(s): 1005 - 1010
  01/01/2015 Authors: Ahmed AA; Abedalthagafi M; Anwar AE; Bui MM
• Sporadic hemangioblastomas are characterized by cryptic VHL inactivation.
  Acta Neuropathol Commun Volume: 2 Page(s): 167
  12/24/2014 Authors: Shankar GM; Taylor-Weiner A; Lelic N; Jones RT; Kim JC; Francis JM; Abedalthagafi M; Borges LF; Coumans J-V; Curry WT
• Angiomatous meningiomas have a distinct genetic profile with multiple chromosomal polysomies including polysomy of chromosome 5.
  Oncotarget Volume: 5 Page(s): 10596 - 10606
  11/15/2014 Authors: Abedalthagafi MS; Merrill PH; Bi WL; Jones RT; Listewnik ML; Ramkissoon SH; Thorner AR; Dunn IF; Beroukhim R; Alexander BM
• Adjuvant radiation therapy, local recurrence, and the need for salvage therapy in atypical meningioma.
  Neuro Oncol Volume: 16 Page(s): 1547 - 1553
  11/01/2014 Authors: Aizer AA; Arvold ND; Catalano P; Claus EB; Golby AJ; Johnson MD; Al-Mefty O; Wen PY; Reardon DA; Lee EQ
• Clinical multiplexed exome sequencing distinguishes adult oligodendroglial neoplasms from astrocytic and mixed lineage gliomas.
  Oncotarget Volume: 5 Page(s): 8083 - 8092
  09/30/2014 Authors: Cryan JB; Haidar S; Ramkissoon LA; Bi WL; Knoff DS; Schultz N; Abedalthagafi M; Brown L; Wen PY; Reardon DA
• Isolated cerebral mucormycosis of the basal ganglia.
  Clin Neurol Neurosurg Volume: 124 Page(s): 102 - 105
  09/01/2014 Authors: Malik AN; Bi WL; McCray B; Abedalthagafi M; Vaitkevicius H; Dunn IF
• Autopsy Neuropathology of a Case of Microcephaly-Thin Corpus Callosum Syndrome
  Volume: 73 Page(s): 620 - 620
  06/01/2014 Authors: Abedalthagafi M; Urion D; Engle E; Kinney H; Folkerth R
• Clinical Molecular Staging in Meningiomas: Prospective Experience of a Single Institution Using Routine FFPE Samples
  Volume: 27 Page(s): 433A - 433A
  02/01/2014 Authors: Abedalthagafi MS; Ramkissoon SH; Ligon KL; Ligon AH; Folkerth RD; Santagata S
• Clinical Molecular Staging in Meningiomas: Prospective Experience of a Single Institution Using Routine FFPE Samples
  Volume: 94 Page(s): 433A - 433A
  02/01/2014 Authors: Abedalthagafi MS; Ramkissoon SH; Ligon KL; Ligon AH; Folkerth RD; Santagata S
• The Genomic Copy Number Profile of Angiomatous Meningioma
  Volume: 94 Page(s): 433A - 433A
  02/01/2014 Authors: Abedalthagafi MS; Ramkissoon SH; Ligon KL; Ligon AH; Folkerth RD; Santagata S
• The Genomic Copy Number Profile of Angiomatous Meningioma
  Volume: 27 Page(s): 433A - 433A
  02/01/2014 Authors: Abedalthagafi MS; Ramkissoon SH; Ligon KL; Ligon AH; Folkerth RD; Santagata S
• The alternative lengthening of telomere phenotype is significantly associated with loss of ATRX expression in high-grade pediatric and adult astrocytomas: a multi-institutional study of 214 astrocytomas.
  Mod Pathol Volume: 26 Page(s): 1425 - 1432
  11/01/2013 Authors: Abedalthagafi M; Phillips JJ; Kim GE; Mueller S; Haas-Kogen DA; Marshall RE; Croul SE; Santi MR; Cheng J; Zhou S
• Altered Telomeres with Loss of ATRX Protein Are Frequently Seen in High-Grade Pediatric Gliomas
  Volume: 93 Page(s): 413A - 414A
  02/01/2013 Authors: Abedalthagafi M; Phillips J; Ellison D; Judkins A; Mueller S; Marshall R; Haas-Kogan D; Perry A
• Altered Telomeres with Loss of ATRX Protein Are Frequently Seen in High-Grade Pediatric Gliomas
  Volume: 26 Page(s): 413A - 414A
  02/01/2013 Authors: Abedalthagafi M; Phillips J; Ellison D; Judkins A; Mueller S; Marshall R; Haas-Kogan D; Perry A
• Radiation-induced glioma following CyberKnife treatment of metastatic renal cell carcinoma: a case report.
  J Med Case Rep Volume: 6 Page(s): 271
  09/03/2012 Authors: Abedalthagafi M; Bakhshwin A
• Gastrointestinal stromal tumour originating from the hepatic falciform ligament.
  BMJ Case Rep Volume: 2012
  07/10/2012 Authors: Abedalthagafi M
• Duplication of C7orf58, WNT16 and FAM3C in an obese female with a t(7;22)(q32.1;q11.2) chromosomal translocation and clinical features resembling Coffin-Siris Syndrome.
  PLoS One Volume: 7 Page(s): e52353
  01/01/2012 Authors: Zhu J; Qiu J; Magrane G; Abedalthagafi M; Zanko A; Golabi M; Chehab FF
• CyberKnife radiosurgery for inoperable stage IA non-small cell lung cancer: 18F-fluorodeoxyglucose positron emission tomography/computed tomography serial tumor response assessment.
  J Hematol Oncol Volume: 3 Page(s): 6
  02/04/2010 Authors: Vahdat S; Oermann EK; Collins SP; Yu X; Abedalthagafi M; Debrito P; Suy S; Yousefi S; Gutierrez CJ; Chang T
• Sporadic Cutaneous Angiosarcomas Generally Lack HIF1 alpha; a Histologic and Immunohistochemical Study of 45 Cases
  Volume: 23 Page(s): 112A - 112A
  02/01/2010 Authors: Desouki MM; Abedalthagafi M; Rushing EJ; Marwaha J; Auerbach A; Fanburg-Smith JC
• Sporadic Cutaneous Angiosarcomas Generally Lack HIF1 alpha; a Histologic and Immunohistochemical Study of 45 Cases
  Volume: 90 Page(s): 112A - 112A
  02/01/2010 Authors: Desouki MM; Abedalthagafi M; Rushing EJ; Marwaha J; Auerbach A; Fanburg-Smith JC
• Sporadic cutaneous angiosarcomas generally lack hypoxia-inducible factor 1alpha: a histologic and immunohistochemical study of 45 cases.
  Ann Diagn Pathol Volume: 14 Page(s): 15 - 22
  02/01/2010 Authors: Abedalthagafi M; Rushing EJ; Auerbach A; Desouki MM; Marwaha J; Wang Z; Fanburg-Smith JC
• Detection of Metastases in Sentinel Lymph Nodes of Breast Cancer Patients: An Evaluation of Molecular Markers Using Intraoperative Real-Time Reverse Transcriptase-Polymerase Chain Reaction Assay (RT-PCR)
  Volume: 132 Page(s): 621 - 621
  10/01/2009 Authors: Abedalthagafi M; Shen R; Willey S; Liu MC; Sidawy MK
• Absence of FLT3 and JAK2 (V617F) mutations in Langerhans cell histiocytosis.
  Leuk Res Volume: 33 Page(s): e173 - e174
  09/01/2009 Authors: Abedalthagafi M; Guo H; Hartmann D-P; Ozdemirli M
• Diagnostic evaluation of metastatic placental site trophoblastic tumor.
  Obstet Gynecol Volume: 114 Page(s): 465 - 468
  08/01/2009 Authors: Kelly T; Alvis C; Abedalthagafi M; Barnes W
• Asymptomatic diffuse "encephalitic" cerebral toxoplasmosis in a patient with chronic lymphocytic leukemia: case report and review of the literature.
  Int J Clin Exp Pathol Volume: 3 Page(s): 106 - 109
  03/15/2009 Authors: Abedalthagafi M; Rushing EJ; Garvin D; Cheson B; Ozdemirli M
• Historic milestones in the evolution of the crossmatch.
  Immunohematology Volume: 25 Page(s): 147 - 151
  01/01/2009 Authors: Sandler SG; Abedalthagafi MM
• Primary retroperitoneal mucinous cystadenoma.
  Saudi Med J Volume: 30 Page(s): 146 - 149
  01/01/2009 Authors: Abedalthagafi M; Jackson PG; Ozdemirli M
• Is a computer crossmatch in the absence of an immediate-spin antibody screen adequate for persons identified to be at increased risk of forming new blood group antibodies?
  Transfusion Volume: 48 Page(s): 2265 - 2266
  10/01/2008 Authors: Sandler SG; Abedalthagafi M; Langeberg A